Lottia gigantea (owl limpet): LOTGIDRAFT_166366
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Entry
LOTGIDRAFT_166366 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_166366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_166366
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LOTGIDRAFT_166366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_16
AAA_14
AAA_2
AAA_5
AAA_28
AAA_22
RNA_helicase
NPHP3_N
AAA_33
AAA_17
Mg_chelatase
nSTAND3
AAA_18
Rad17
ABC_tran
TsaE
NB-ARC
NACHT
Cytidylate_kin2
AAA_3
Viral_helicase1
IstB_IS21
Parvo_NS1
Zeta_toxin
Vps4_C
Sigma54_activ_2
SLFN-g3_helicase
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
20240309
NCBI-ProteinID:
XP_009061663
JGI:
166366
UniProt:
V3ZYQ8
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MYRTSKTEPEPVWSTPSTEKSLNTKSTNIDTSLQNGQTKEIEVEVKTKRKITKVEETPNK
KKKKEKEKKIPEIQASTVKFSDIGGNEETLKEVCKLLVHMKHPEVYKQLGVTPPRGFLLH
GPPGCGKTLLANAIAGELGLPFIKLAATEVVSGVSGESEEKIRDLFEKAVSNSPCIVFMD
EIDAITQKRETASKEMERRIVTQLLACLDDLNSKPEANVLVIGATNRPDSIDPALRRAGR
FDREISLGIPDESARYRILQVLCRELRLSTDFSYESLAHNTPGFVGADLSALAREAAMNA
VNSVTMVKRTTSIIRSPTTESLHYYGRFSDVSALKHVQPSAKREGFATIPDVTWDDIGAL
KQVRDELQLAILAPVKHSAEFKALGLTSPPGILLAGPPGCGKTLLAKAIANESGINFISV
KGPELLNMYVGESERAVRQVFQRGRNSSPCVIFFDEIDSLCPRRSAATDGGASVRVVNQM
LTEMDGLETRKQVYIMAATNRPDIIDPAILRPGRLDKTLYVGLPTVEDRLEILLTITKNG
TKPKLAEDVKLIDIAANEKCDGYTGADLAALVREASVCALKELIQQTSTNTAVPMVTRQH
FDLALNKIKPSVSKKRLQNKLQKII
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaacaagtaaaacagagccagaaccagtgtggtcaacaccctctactgagaaa
agtttaaatacaaaatcgactaatattgatacctcacttcaaaatggacagactaaagaa
attgaggttgaagttaaaaccaaaagaaaaattacaaaggtagaggaaactcctaacaaa
aagaaaaagaaagaaaaagaaaaaaaaataccagaaatccaagcatctactgtgaaattt
agtgatattggtggaaatgaagaaactttaaaagaagtatgtaaattattggtacatatg
aaacatcctgaagtatataaacaactaggtgtgaccccacctagaggatttttattacat
ggacccccagggtgtggcaagaccttattggctaatgcaatagcaggggaacttggttta
ccatttattaaactagcagcaactgaagtggtatcaggtgtttctggtgaatcagaggag
aagattagagatctatttgaaaaagctgtttctaattcaccgtgtatagtgtttatggat
gagatagatgctataactcagaaaagagaaacagcatctaaagagatggaaagaagaatt
gtcactcagttattagcctgtttagatgatttaaacagtaaaccagaagctaatgtatta
gtaataggagctaccaatagacctgatagtattgatcctgccttaagacgtgctggaaga
tttgatagagaaatatcattaggtatacctgatgaatcagccagatatagaatattacaa
gtactgtgtagagaattaagattatcaacagattttagttatgaatcactagctcataat
actccaggttttgttggtgctgatttatcagctctagcaagggaggcagccatgaatgct
gttaatagtgttacaatggttaaaagaacaacctccattatcagatcaccaactacagaa
tctcttcattactatggaagattttcagatgtttcagcattgaaacatgttcagccatca
gctaaaagagaaggttttgctactataccagatgttacatgggatgatattggtgcttta
aaacaagttagagatgaactacagttagccatattggcaccagtcaaacacagtgctgag
tttaaagctcttggactcacatcacctccaggaatattattagctggtcctccaggttgt
ggtaaaacattactggctaaagctatagctaatgagtctggtattaactttatatctgtc
aaaggtcctgaattattaaacatgtatgtcggtgaaagtgaacgagccgttagacaagtg
tttcaaaggggccgtaactcctctccatgtgtgatattttttgatgaaattgattccctt
tgtcctagaagatctgctgcaacagatggaggagccagtgttcgagttgtcaatcaaatg
ttaacagagatggatggattagaaactagaaaacaggtttatattatggctgctactaac
agaccagatattattgatcctgctatactacgaccaggtagattagataaaacattatat
gttggtttacctacagtagaagatagactggagattttacttactataacaaagaatggc
actaaacccaaactagcagaagacgtaaaattaattgatattgccgccaatgaaaaatgt
gatggatacactggagcagacctagcggcactagtaagagaagcatcagtatgtgcttta
aaagaattaatacaacagacatctacaaataccgctgttcccatggtaacaagacaacat
tttgatctggcattaaataagattaaaccctcagtttctaaaaagagattgcagaacaaa
ttacaaaaaataatatga
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