Lottia gigantea (owl limpet): LOTGIDRAFT_168884
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Entry
LOTGIDRAFT_168884 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_168884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_168884
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LOTGIDRAFT_168884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
20240994
NCBI-ProteinID:
XP_009065419
JGI:
168884
UniProt:
V3ZN44
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSSNTIDDLTTKLAGTTVEANTELVYKKKNSTFKLNTAQDAQELVTSIETFSNLKALRLE
GNTLGIEAAEAVGKALQKHPEFERALWSDMFTGRLKTEIPHALKHLGAGIMTAGAKLVEL
DLSDNAFGPNGMNGLVDLLPSSSCYTLNILKLNNNGLGITGGKMLAKCLTECYENSKTAG
RPLALKVFISGRNRLENDGTKALAQVFKMIGTLENISMPQNGINPPGILALVDALNTNPN
ITTLNLNDNTVTEKGAVSLVQVLPKLTNLEILNLGDCLLRNGGAKKLATVLQDNNHKLKE
LILSGNEIKQDGANEVIESIENKQNIQKLDLDTNQFGEEGCDIIRGMLEAMNKEDILESL
SGDEGTDDEEEDEDGEEDDDDVEESEGEEVNDPELQVKGQSLTPQKKVTAGDFLAFPSPT
KLQHLGDNKGEAIKAELGNESNDIEKVVDTIFRISSIVTESDVTTKTTACQCADELLKSI
VKDESESSLFTNLYLVKLGLIKGEDKKYRPPTDVSGPLLVLTHIIQQEYIAHISREILQI
FIAKTHPVLDKAQSARHQLLQTLYAF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaatacgatcgacgatttgactacaaaattggctggaacaactgttgaagcg
aatacagagcttgtttataaaaagaaaaattctacgtttaaactgaatacagcccaggat
gcacaagaattggtgacatctatagaaaccttcagcaacctaaaagctttaagattagaa
ggaaatacgctgggtatagaagctgctgaagctgtgggcaaagctctacagaaacacccc
gagtttgagagggcgttatggagtgatatgtttacaggcagattaaaaacagaaattcca
catgcactgaaacatctaggagctggtataatgacagctggagctaagttagtggaacta
gatctcagtgataatgcgttcggtcctaatggtatgaacggtctggttgatttattacca
agttctagttgttatactcttaatatacttaaacttaataataacggtttgggtatcact
ggtggcaagatgttagccaagtgtttaacagaatgttatgaaaacagtaaaacagcaggg
cgacctctggcattaaaagtatttatatctggtagaaacaggctagaaaacgatggtact
aaagctctggcacaagtctttaagatgattggtacattagaaaatatctcgatgccacag
aatggtattaaccctccaggaatcttggctctagtggatgccttgaacaccaaccccaat
ataacaacattaaacttgaatgataatactgtcacagagaaaggtgccgtttcattagta
caggttttacccaaattaacaaatttagaaatattaaatcttggtgactgtttattacgt
aacggtggggccaagaaattagccacggttttacaggacaataaccataaattaaaggag
ttgattctatcaggaaatgagatcaaacaagatggcgccaatgaagttatagaatctata
gagaataaacagaatatacaaaaacttgatctagatactaaccagtttggagaagaagga
tgtgatataataagaggcatgttggaagccatgaataaagaggatattttggagtctctc
agtggtgatgaaggaacagatgatgaagaggaggatgaagacggagaagaagatgatgat
gatgttgaggagtctgaaggtgaagaggtcaatgaccctgaattacaggtcaaaggtcaa
tcattaacccctcagaaaaaggtgacagctggtgattttctagctttcccctcacccacc
aaattacaacatctcggtgataacaaaggagaagcaatcaaggctgaattagggaatgag
agtaatgatatagagaaagttgtagatactattttcaggatttctagtattgtaacagaa
agtgatgttaccaccaaaacaacagcttgtcaatgtgcagatgagttattaaagtcaata
gtcaaagatgaatccgagagttctttatttactaatttatacctcgttaagctgggatta
attaagggtgaagacaagaaatatcgtcccccaacagacgtcagtggtccactgttagtt
ttaactcatataatacaacaagaatacatagctcatatctctcgtgaaatactacaaatt
tttattgccaaaactcatcctgtattagataaagctcagtcagctcgacatcagttacta
cagacattatacgcattctaa
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