Lottia gigantea (owl limpet): LOTGIDRAFT_170435
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Entry
LOTGIDRAFT_170435 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOTGIDRAFT_170435
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lgi01007
]
LOTGIDRAFT_170435
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_170435
Enzymes [BR:
lgi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LOTGIDRAFT_170435
Amino acid related enzymes [BR:
lgi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LOTGIDRAFT_170435
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LOTGIDRAFT_170435
Prokaryotic type
LOTGIDRAFT_170435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
20241400
NCBI-ProteinID:
XP_009067325
JGI:
170435
UniProt:
V3ZI83
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MNLGQLIARNHAFVAKLYRNSVSKKSFCRTNLTRRLKALSVTCPIRDNHTKSSSLYYPEE
DYTVDVPVDIDLNLEKILASPASLKENLAERNITLDVDKLIQDFKLMCDLEKKKCDFESE
RKDIGKRVTELINLMKKSGENDNLVKSVDVLKSRGNKLKKLEKELSDRYFAIKHAVMLDG
LKIPNRIHPETPTSAQILRSFGNIMDFSKSRSHIEIGREKDLIKFSDIGPKSFYLKGDLA
LCELELIDKTKKFLQQNGMTTFLLPDKVRSIIMEGCGFDVDSDKILTIHDPDPRESKVID
EHHLQGNSVQSFVAFLMRQMVDNSQLPLKYFSVGSRYVSGTELPGLFGGHQYANAVIFGA
SLSETESSNLFQEYSELIWSFLESFNLPIRQILVPVQDLSLSESLRSEFQMWSPSLEDFV
NMGYLCMCDDFVSRRLMCLHDSKKEGSMFVHMIGGEVINITNLLALMLEYDLPLISNK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcggccaactaattgcgaggaatcatgctttcgttgcaaaactatacaggaat
tctgtgtctaaaaagagcttttgcaggacaaatcttaccagaagactgaaagcattgagt
gtgacctgtcccataagagacaatcacaccaagtcttcatccttgtattatcctgaggag
gattacactgttgatgtgcctgttgacatagatctaaatttggaaaagattctcgcttct
cctgcgagtctcaaagagaatcttgccgaaaggaatataactttagatgtggataaactt
attcaagatttcaaattaatgtgcgatttagagaagaaaaaatgtgattttgagtccgaa
agaaaagatataggaaaacgtgttacagaattgataaacttgatgaaaaaatctggggaa
aatgataatttggtgaaatcagttgatgtgttgaaatctagaggcaataaattgaaaaaa
ctagaaaaagaactaagcgatcgttactttgcgattaaacacgctgtcatgttagatggt
cttaagattcccaatagaattcatcccgagactccaacatcggcacaaattctgcgatca
tttgggaatataatggatttttcgaaaagcaggagtcacatcgaaattggacgtgaaaaa
gacttaattaaatttagtgacattggtcccaaatcattctatctgaagggggatctggct
ttatgtgaattggaattgatagataaaacaaaaaaattcttgcaacagaatggaatgacg
acatttttgttgccagataaagtgagatctataataatggaaggttgtggatttgatgtg
gatagtgacaaaattttgacaattcatgatccagatcctcgagaatcaaaagtgattgat
gaacatcacttgcaaggaaactcagtccaatcatttgttgcatttttaatgagacaaatg
gtagataactctcaacttccactaaaatacttctctgtgggaagcagatatgtgtctgga
accgaacttccaggattattcggaggtcatcagtatgcaaacgccgtcatatttggtgct
agtttgtcagaaacagaatcttcgaatttatttcaagaatattctgaattgatatggagt
tttttggaatcgtttaatctgcctattagacaaattcttgtgcctgttcaagatttgtcc
ttatcagaaagtttgagatcagaatttcagatgtggagtcctagtttagaagattttgtg
aacatgggttatctatgtatgtgcgatgactttgttagccgtagattaatgtgtcttcat
gacagtaagaaagagggttctatgtttgtccacatgataggtggagaagttataaacatt
actaatctgttagctttgatgttagaatatgatttgcctttaatctctaataaatga
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