Lottia gigantea (owl limpet): LOTGIDRAFT_173162
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Entry
LOTGIDRAFT_173162 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_173162
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_173162
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LOTGIDRAFT_173162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20242302
NCBI-ProteinID:
XP_009048878
JGI:
173162
UniProt:
V4CEN9
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MEGDDEVCVPFQDMGLDDRLLKAISLMNWGEPTPIQEKAIPLALEGKDILARARTGSGKT
GAFCIPAINKILMHKKNVEEQTVKAVILTPSKELCNQAFKNVSALTRCCSRDVTCFDVAP
QVSLSSQRPMLMERPDIVVGTPSRLLAHIKKGNLDVKSSLEMIVIDEADLVFSFGHEEDM
KELLKHFPEKYQALLMSATLTDEVKTLKKMVLHNPVILKLEESQLPETNQLTQYVVKCEH
RDKFALLCALLKLRLIRGKSILFVNSVNKCYKLKLFLEQFGVPTCVLNSELPIKSRCHIV
SQFNEGLYDYIIASDESACFNPVGKALDKSHKGSKKDKEYGVSRGIDFHNVTNVINFEFP
KTVKSYIHRVGRTARGTKKGTALSFVNVKEMKLLEDVEKDLAEQPGGNKLEPFQFNMAEI
EGFRYRSKDAMMSVTHQAIQEARLKEIKSEMLSSQKLKSYFEDNPKDLQVLRHDKPLRTV
KQQEHLKHVPDYIVPRSLHGYRGLKSRSNQSHHPYASTQSHAQKRYQRMKSDPLRSFEFT
KGRKHFRKK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgacgatgaagtgtgcgtcccttttcaggatatgggattagacgacaggctt
ctaaaggcaatatcacttatgaattggggagaaccaactccaattcaagaaaaagcaata
cctcttgctttagaaggaaaagatattcttgcccgagcccgaacaggttctggaaaaact
ggtgccttctgtattcctgcgattaacaagattttgatgcacaagaaaaatgtagaagaa
caaacagtaaaggctgttatcttaactccatcaaaggaattatgtaatcaagcatttaag
aatgtatctgcacttacacgatgctgctctcgggatgtcacatgttttgatgttgctcca
caagtttctttatcttcacagagaccgatgttaatggaaaggccagatatagttgttggg
acacctagtcgtttattagctcacattaagaaaggaaacctggatgtaaaatctagtcta
gaaatgatagtaattgatgaagctgaccttgtattttcctttggtcatgaagaggacatg
aaagaattattaaaacattttcctgagaaatatcaagctttattaatgtcagctacgtta
acagatgaagttaaaacattaaagaaaatggttttacataatccagtaatattaaagttg
gaagaatctcaactaccagaaacaaatcaattaacacagtatgttgtcaagtgtgaacac
agagataagtttgctttattatgtgcattattaaagctgagattaattcgaggaaaatcg
attttatttgttaattcagtcaataaatgttacaaattgaagttgtttttagaacaattt
ggggtaccaacttgtgtgttaaattcagaacttccaataaaatccagatgtcatatagta
agtcagtttaatgaaggtttatatgattatattattgcctctgatgaatcagcatgtttt
aatcctgttggtaaagcattagacaaatcacataagggttccaaaaaagacaaagaatat
ggtgtttcacgaggtattgattttcataatgtaacaaatgtgatcaattttgagtttcct
aagactgtcaaaagctatattcatagagttggaagaacggctcgtggaacaaaaaaaggt
acagccttgtcatttgtaaatgtaaaagaaatgaaactgttagaagatgtagaaaaggat
ttagctgaacaaccaggaggtaataaactagaaccatttcagtttaatatggcagaaata
gaaggatttagatacagatcaaaggatgctatgatgtcagtaactcaccaagccatacag
gaagccagattgaaagaaatcaaaagtgaaatgttatcttcacaaaaattgaagtcatat
tttgaagataatcccaaagatttacaagttctacgccatgataaaccattaagaacagtt
aaacagcaggaacatttgaaacatgtgcctgattatattgtcccaagaagtttacatggt
tataggggattgaaaagcaggtcaaaccaaagtcaccatccttatgcaagcacacaatca
catgctcaaaaacgataccagagaatgaaatctgatccactaagaagttttgaatttaca
aaaggcaggaagcattttagaaaaaaataa
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