Lottia gigantea (owl limpet): LOTGIDRAFT_174217
Help
Entry
LOTGIDRAFT_174217 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
lgi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_174217
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_174217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_174217
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_174217
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
U-box type E3
LOTGIDRAFT_174217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
Motif
Other DBs
NCBI-GeneID:
20242659
NCBI-ProteinID:
XP_009050794
JGI:
174217
UniProt:
V4AN03
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MSELTPDEIRRRRLARLGGGSQPSTPQSSGNNDASSSTAGPSTGPPTTPLSSRNPPSSLE
IESQTSSMETDGPSSSLDTVVMESQPQSSSQTMELDSECMEKSSQPSQMDVDSGIENMET
EESDSRPEAKRHRDTSYGSEATEDQMLNAVSRIFVVSWKEESTSDTLHLPDISSCIQQQQ
GCVNFRNVINQILMEVLMKIQDGSENPLLTLRPVTPVVSPMKNYSGSPRSISPMQLTPDV
PKREFISRCEPLVCKEVDMINYLLDSYERVSIEERTAPKRTSIPPMSEVLSIARNQCILL
TSLVLQGTFTEQRSQIIGTSHLLPYLMSHNLPRGFLPELVQTVCVEGEGFSRVFSPLLQS
LHRMMQTVYLDTDDYREPLAILAELCEIKSGNSRPICKLITQQSNWNYAPVSKATGLEVE
KLSFLGPFLALSVFAEDNIKVVEKFFAGPPQMLRADTLNVAYQSLRHKLEYARTELHKII
HAMLVNIDTRDSALQYLASALQRNSTRSQLQVDEKLVAGDGFMLNLLSILQKLSFKIVIN
KVDTFYPFHPNSLMDFSTETCFNCSTEDLSSWKNSLKEQTPPPWQEPKFPTMCFFMTIYC
HHLSIIPIIVKYLRRIRFVRQLSHNIEELERLKSQWEKTQAARRNQILLKTWKSQMQRLQ
KSKLCCDAGVLDSLMLQRCLQYYSQVAHYLLNLVNLEPSNSSRLPNLSEVSMQFRALPEY
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctcactcctgatgagattcggagaagaaggttggctcgtttaggcggtggg
agccagccctcaactccacagagttctggtaataatgatgcaagctcatccactgctggt
ccttccactggaccccctactactcctctttcatctcgaaatccaccaagtagtttagaa
atcgagtcccagacgtccagtatggaaacagatggacctagttctagcttagatacagtc
gtcatggaatcacaacctcaatcttctagtcaaactatggaattagattccgaatgtatg
gagaaaagtagtcagccaagtcagatggacgtagattcaggaatagaaaacatggaaaca
gaggagagtgattcaagacctgaagcaaaacgtcacagggatactagttatggatcagaa
gcaaccgaagaccagatgttgaatgctgtgagtcgtatattcgtggtgtcctggaaagaa
gagtctaccagtgatacgttacatcttccagacatctcatcctgtatccaacaacaacaa
ggatgtgtcaatttccgaaatgttataaaccagatattgatggaagttttaatgaagata
caagatggttctgaaaatcccttgttgaccttacgacctgtgaccccggtcgtgtcaccg
atgaaaaactacagtggtagccccagaagtataagtccaatgcagctgacccccgacgta
ccgaaacgagagtttatatcccgatgtgagccattagtatgtaaagaagtagatatgatt
aattatttattagattcgtatgaacgtgtcagtatagaagaacgtacagctcctaagaga
actagtataccaccaatgagtgaagtgttatctatagctagaaatcagtgtattctacta
acatcattagtattacaaggtacttttactgaacaaagatctcaaattattggaacatca
catctcctgccatatttaatgtctcacaacctacctcgtggattcctaccagaactcgtt
caaactgtctgtgtcgagggagaaggcttctctagggtatttagtccattactacagtca
ttacaccgtatgatgcagactgtttatttagatactgatgattatcgagaacccctggct
atcctggcagaattatgtgagatcaaatcaggcaattccaggcctatttgtaaattgata
acacaacagagtaattggaactatgctccggtatctaaagcaactgggttagaagtagag
aaattgtcattcctcggcccgttcctggctctttcagtatttgctgaagataatattaag
gtagtagagaagttttttgctggtccaccccagatgttacgagcagacacactgaacgta
gcttatcaatcattacgacataaactggagtacgctagaacagaactacataaaataata
catgctatgttggtgaatattgatacgagagattcagctttacaatacttggcttcagct
ttacagagaaactctactcgatctcagttacaggttgatgagaaactggtagctggtgat
ggtttcatgttaaatcttctctccatattacaaaaattatcttttaaaatagtcatcaat
aaggtcgacacattttatccattccatcccaacagtttaatggatttctccacagaaacc
tgttttaactgctccacagaagatctgagctcatggaaaaactccctcaaagaacagacg
cctcctccatggcaagaaccaaaattccctaccatgtgtttctttatgacaatatactgt
catcacctgtcaatcatacctatcattgttaaatatctacgacgtattcgtttcgttcga
caactgtcacacaatatagaggaactagaaagattaaaatctcagtgggagaaaacacag
gcagctagacggaaccaaatattgctcaaaacctggaagtcacaaatgcagcgtctacag
aagagtaagctatgctgtgatgctggagtgttagattcgttgatgttacaacgttgttta
caatattattctcaagtagctcattatcttcttaatttagtcaatctggaacctagtaat
agttccagattaccaaacctatcagaagtttccatgcagttccgagcattaccagaatat
tcctag
DBGET
integrated database retrieval system