Lottia gigantea (owl limpet): LOTGIDRAFT_174239
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Entry
LOTGIDRAFT_174239 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_174239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_174239
Spliceosome [BR:
lgi03041
]
Complex A
U1 snRNP components
U1 related factors
LOTGIDRAFT_174239
Complex B
LOTGIDRAFT_174239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Peptidase_C93
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
20242666
NCBI-ProteinID:
XP_009050817
JGI:
174239
UniProt:
V4AY45
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MPVPPMGMPGIPPMGMPPMGIPPMGMISKSFYAPTFLKTLWSEHKAPDGRTYYYNNMTKQ
SSWEKPLELKSDAEKMLSQCPWKEYKSDSGKVYYHNAQTKESKWTKPKELEDLESIPPVA
PVLVPPVLPKSAPSSAIEQAMQATLASIELPPAAGTATKNSGAAPVAVEVEDSSSSSEEE
PPPKKEAPLVFKTKKEAIEAFKSLLKEREVPSTAPWEQAMKLIINDQRYGALKHLNEKKQ
AFNEYKTQRAKEEKEEQRLRMKQAKEDLEKFLMSNEKMNSTVKYWKADNMFGDQEAWKIV
HDRDRRDLFDDVVHLLSKREKEEAKALRKRNIKVFSEILDSMPHLTHSTTWSELQQMLVD
NPRFTDDPDLGSMDKEDALICFEDHIRLLEQENDDEKERERRRLKRQQRKNRESFLVLLD
ELHDKGKLNSMSLWMDLYPVISQDVRFTNMLGQPGSTPLDLFKFYVEDLKARFHDEKKIV
KEILRDKGYVVEVNTVFDEFGSIITNDKRSANLDSGNIKLTYNSLIEKAEAREKERLKEE
ARKLKKLENAFKSLLKMAEPPVELDTPWDVARQRIEREEGFNIITLESERIRLFKEYLSA
LEESCGHHHPKKKKSKKHKSRRSRSRSSGSESDESTRHKSRKSKKKHRSESRSPSPGSQS
DEKERSSKKHKKKSKKKRHVSRSHNHSSASELSEGELENQRRRLLQELEDNN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaccaccaatgggaatgcctggaataccaccaatgggaatgcctccaatggga
attccgcctatgggaatgatcagtaagtctttttatgcacccacatttttgaaaactctc
tggtctgaacataaagcgcctgatggtagaacctactactacaataatatgacaaaacaa
tcgagttgggagaaaccacttgaactcaagtcagatgcagagaaaatgttatcacaatgt
ccatggaaagaatacaaatcagatagtggtaaagtttactaccataatgcacaaactaaa
gaaagtaaatggaccaaacctaaagaattagaggatctagaaagtataccaccagtagct
cctgtacttgttccacctgttcttccaaagtcagccccctcatcagctatagaacaggcc
atgcaagcaacattggcatcaatagaattacctccagctgcaggaacagctacaaaaaat
tctggggcagctcctgttgctgtggaagttgaagatagcagttcatccagtgaagaggaa
ccaccaccaaaaaaagaagcaccactcgtatttaaaaccaaaaaagaagctattgaagct
tttaaaagtttattgaaagaaagggaggtaccatcaacagcaccatgggaacaagctatg
aagttaatcatcaatgatcaaagatatggtgctctcaaacatttaaatgagaagaaacaa
gctttcaatgaatacaaaacacaaagagctaaggaagaaaaggaagaacagagattaaga
atgaagcaagctaaagaagatcttgagaaattcttaatgagtaatgaaaaaatgaattca
actgtgaaatattggaaagctgacaatatgttcggagatcaagaagcatggaagattgtt
catgatagggatcgaagagatctatttgatgatgttgttcatctcttgtctaaaagagag
aaggaagaagctaaagccctcagaaagcgtaacattaaagtgttctcagaaattttagat
agtatgcctcatttaacccattctaccacttggtcagaattacaacagatgttggtagat
aatcctagatttactgatgatcctgatttaggcagtatggataaagaagatgctctgata
tgttttgaagatcatattagattattagaacaagagaatgatgatgaaaaagaaagagaa
aggagacgattaaaaagacaacaacgaaaaaatagagaaagttttctggtcctgctagat
gaacttcatgacaaaggtaaattaaattcaatgtcattatggatggacctgtacccagtt
atatctcaagatgtccgatttaccaatatgctgggtcagcctggttctacacctttggat
ctttttaaattctatgtagaggatttgaaagcaagattccatgatgagaaaaaaatagtg
aaagaaattttgagagataaaggctatgtggtagaagttaatacagtatttgatgaattt
ggttctattattaccaatgataaaagatctgctaatttagattctggtaacatcaaatta
acgtataatagtttaatagaaaaggcagaagccagggagaaagaaaggttaaaagaagaa
gctagaaagttgaagaaattagaaaatgcatttaaatcattgttaaagatggctgagcca
ccagtagaattagatacaccttgggacgttgccagacaaagaatagaaagagaggaaggc
tttaatattatcacattagagtcagaacgtatcagactatttaaagaatatttatcagct
ttagaagaatcctgtggtcatcatcatccaaagaagaagaaatccaaaaaacataaaagc
agacggtcaaggtccaggtcttcaggaagtgaatcagatgaatcaaccagacacaagtct
agaaagtcaaagaaaaaacatagatctgagtccagatcacctagtcctggttcacagtca
gatgaaaaagagagaagtagtaaaaaacacaagaagaaatcaaaaaagaaaagacatgtg
tcaagatcacataatcatagttctgccagtgaattgagtgaaggagaattagaaaatcag
agaagaagattattacaggaactagaagataacaattag
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