Lottia gigantea (owl limpet): LOTGIDRAFT_176078
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Entry
LOTGIDRAFT_176078 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOTGIDRAFT_176078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_176078
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
LOTGIDRAFT_176078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
20243583
NCBI-ProteinID:
XP_009064172
JGI:
176078
UniProt:
V3ZRF5
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MATMNVEKAHEVREVDTAAAGRGVWLVKVPKYLSEIWKESPPNSDVGKLKITKSKLPGQK
PEVVFTAKETSADIPKDHKFVLTGVGTQNLVVFSQTPIYAESKATGSKELVSEKIAVDGK
VIQRAECRPIADETYKKLKRFNFEQGNKPKREIKQLDRIVQVYKPKDYVSA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgaatgttgaaaaagctcatgaagtaagagaagtagatacagcagctgct
ggtcgtggtgtctggcttgtcaaggtaccaaaatacttatcagaaatctggaaagaatct
ccacctaattctgatgttggaaaactcaaaataacaaaatcaaaattgcctggtcagaag
cctgaagttgtctttacagccaaagaaacctcagcagatatacctaaagatcataagttt
gtgttaactggtgttggtacacagaatttagtggtcttttcacagactcctatatatgct
gaaagtaaagctacaggttccaaagagctggtctcagaaaaaatagcagtagatggaaaa
gtaatacagagagctgaatgtcgtcctatagcagatgaaacatataaaaaattaaaaagg
tttaattttgaacaaggtaataaacctaaacgtgaaataaaacagttagatagaatagta
caggtttataaaccaaaagattatgtttctgct
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