Lottia gigantea (owl limpet): LOTGIDRAFT_177712
Help
Entry
LOTGIDRAFT_177712 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOTGIDRAFT_177712
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgi01002
]
LOTGIDRAFT_177712
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_177712
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_177712
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_177712
Peptidases and inhibitors [BR:
lgi01002
]
Metallo peptidases
Family M67
LOTGIDRAFT_177712
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
LOTGIDRAFT_177712
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
LOTGIDRAFT_177712
BRISC complex
LOTGIDRAFT_177712
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
LOTGIDRAFT_177712
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
LOTGIDRAFT_177712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
20244229
NCBI-ProteinID:
XP_009044346
JGI:
177712
UniProt:
V4BG98
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MAINSVRLVADAYLVCITHALSTEREEVMGLLIGEVDEKQVSHISAVIMLRRSDKRPDRV
EISPEQLSDASTKAEMLAKELDRPMRVLGWYHSHPHITVWPSHVDVQTQAMYQMLDDCFI
GLIFSVFNEDKNSKQNRVQLTCFQSMNYGGQYERVEVPVHIVPSSGIGSPALDSLVELPR
ILSMEEEEAYNQTTREKDLDLITKIQNASVYTKCLCHIMEVMSGPLIQSLENRLKMNQLK
MEQLLQQREDLKQRLKSVKNS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccattaacagcgttagattagtagcagacgcgtatttggtttgtataactcacgcc
ttgtcgacggaacgagaggaagtcatggggcttttaattggagaagtggacgagaaacaa
gtatcacatatttcagctgttataatgttgagaagatctgataaaagaccagatagagtt
gagatttcaccagaacaattatcagatgcttctaccaaggcagagatgctagcgaaagaa
ttagatagaccaatgagagttctaggatggtatcattctcatccacatattactgtttgg
ccatcacatgttgatgttcaaacacaagctatgtatcagatgttagatgattgtttcatt
ggtttaattttctcagtttttaacgaagataaaaatagcaagcaaaatcgagtccagctg
acatgttttcagtctatgaattatggaggacaatatgaaagagtagaagttccagttcat
atagtgcctagttctggaattggttccccagctttagactctctagtagaattacccaga
atcctcagtatggaggaagaggaagcatataatcagacaacaagagagaaagaccttgac
cttattacaaaaatacaaaacgcatcagtttatacaaaatgtctctgtcatattatggag
gttatgagtggtcctttaatacaatctctagaaaacagactgaaaatgaaccaattaaaa
atggaacagttattacaacaacgggaggatctaaaacaacgcttaaaatcagtgaaaaat
tcttga
DBGET
integrated database retrieval system