Lottia gigantea (owl limpet): LOTGIDRAFT_177862
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Entry
LOTGIDRAFT_177862 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LOTGIDRAFT_177862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_177862
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_177862
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
LOTGIDRAFT_177862
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
LOTGIDRAFT_177862
PBAF complex
LOTGIDRAFT_177862
GBAF(ncBAF) complex
LOTGIDRAFT_177862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
20244242
NCBI-ProteinID:
XP_009046452
JGI:
177862
UniProt:
V4BAM0
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MALQKKKDGHPNNKFFESSETIAQFDSVRTWLQKNCRKYIQADPPTNKSLASLAVLLLQF
QEETFGKHVTNPPLTKLPMKCFMDFKPSGGLCNIFQAVYKFKSDQGWRRFDLQSPSRMDR
NVEMFMNIEKALIQNKCLTLPAIYIRPDVDRILVPKLKDIIKRHQGTITDSSDNATHIVY
TLPTQAPPDEDYFRPVLKRDKYTMVSARWLLDLEEYNEYMNEEDYLVEDEFNIKRSKKDK
KSKRKRSPSPVPDKKKRKSTRTPGGSSSTKKKSMKEEEEEEDLTKDMDEPSPEPNIQEVN
LPKQTSSSRSQKDSELQPIKGATLMDLDEETSEKVDGEKGEATPASEEGSKKEKDDQDDN
VTEQTHHIIVPSYSAWFDYNSIHAIEKRALPEFFNGKNKSKTPEIMLAYRNFMIDTYRLN
PTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTCMGPPPTSHFHIIGD
TPSGLVPINPPRLNQPSAAQQIVDLDKNKEKDDGKELTSFGLKSDMYAKKALKRLQEQNP
NLRCREWTDQETLLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEDFG
HLGPLAYQPIPFSQSGNPIMSTVAFLASIVDPRVASAAARSALGRFYFKFLK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacagaaaaagaaagacgggcacccaaacaacaaattctttgaatcttccgaa
accatagcacaattcgactccgttcgaacatggcttcaaaagaactgtcgaaagtatatc
caagcagatccaccaacaaacaagtccctggccagtcttgctgttttacttctccaattt
caagaagaaacatttgggaaacatgttacaaatccaccacttacgaaactaccaatgaaa
tgttttatggactttaaaccaagtggtggattgtgcaatatatttcaagctgtttataaa
ttcaagagcgaccaaggatggagaagattcgatcttcaatcaccatccagaatggacagg
aatgtagagatgtttatgaatattgagaaagctttaatacaaaataaatgtctgacatta
cctgccatttatatcagacctgatgttgatagaatattagtaccaaaattaaaagatatt
ataaaacgacatcaaggcactataacagatagttctgataatgctactcatattgtttat
accttaccaactcaagcacctcctgatgaggattatttcagaccagtattgaaaagagat
aaatatactatggtatctgctaggtggttattagatctagaggaatataatgaatatatg
aatgaagaagattatttagttgaagatgaatttaatataaaaagaagtaaaaaagacaag
aaatcaaaaagaaaaagatcaccttcacctgtcccagataaaaagaaacgtaaaagtaca
aggacaccaggtggatccagttcaacaaagaagaaatcaatgaaggaagaagaagaggaa
gaagatttaactaaagatatggatgaaccatcacctgaacctaatatacaggaagtcaac
ttacctaaacaaacttccagttcacgtagtcagaaagatagtgagttacaacctattaaa
ggtgccacactgatggatttggatgaggaaaccagtgaaaaggttgatggtgagaagggt
gaagctacaccagctagtgaagaaggtagtaagaaggagaaagatgaccaggatgataat
gttacagaacagacacatcacattattgtacctagttattcagcatggtttgattataat
tctatacatgctatagaaaaacgagctttaccagaattcttcaatggtaaaaataaatca
aaaacaccagaaattatgttggcatatcgtaactttatgatagatacctatagattgaat
ccaactgagtatctaactagtacagcttgtagaagaaatctggctggtgatgtatgtgct
ataatgagggtacatgctttcttagaacaatggggactgatcaactatcaagtagatgct
gattctagaccaacctgtatgggacctcccccaacatctcatttccatattattggtgat
acaccttcaggattggttccgattaacccacctagattgaatcagccatctgcagcacaa
caaattgtagatttagataagaacaaagagaaagatgatggaaaggaactcaccagtttt
ggtttgaagtctgacatgtatgctaaaaaggcactgaagaggttacaagaacagaaccct
aatttacgatgtagagaatggacagatcaagaaacactgttattattagaagcgttagaa
atgtataaagatgattggaataaagtatgtgaacatgttggaagtagaacacaagatgaa
tgtattctacatttcttgcgtttaccaatagaggatccttatttagaggaagattttggt
catcttggacctttggcttatcagcccatacctttctcacagagtggtaatcctatcatg
tcaactgtagctttcctagcctctatagttgatccaagagtagctagtgcagctgccaga
tctgcattgggtaggttctattttaaatttttaaaataa
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