Lottia gigantea (owl limpet): LOTGIDRAFT_178640
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Entry
LOTGIDRAFT_178640 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
LOTGIDRAFT_178640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_178640
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
LOTGIDRAFT_178640
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
LOTGIDRAFT_178640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_ARI1
IBR_1
IBR
IBR_2
Ariadne
Rcat_RNF216
zf-C3HC4_2
UBA_ARIH2_N
zf-C3HC4
PIN-like_DDX60
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
20244290
NCBI-ProteinID:
XP_009056733
JGI:
178640
UniProt:
V4A779
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MGNAEQSAANDRQDEEEFHYNVLSADEIVKFMVDTIKEVNAVVQIPATITRILLNHFKWD
KEKLMERYYDGDQERLFSEAHVVNPHKRDSASGRSRQRVTRSNAGNEELICEICCLGKVS
ADMTGLECGHKFCAECWTDYLTAKIMDEGMGQTISCAAYNCDILVDDATVMSLLKEPKVR
LKYQQIITNSFVDCNRLLRWCPAPDCGHVLKVKYYDCKPVKCSCKHIFCFACGENWHDPV
RCVWLKKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHIVCKNHNCKADFCWVC
LGPWEPHGSSWYNCNRYNEDEARKARDNQEKSRSALQRYLFYCNRYMNHMQSLKFENKLY
ASVKTKMEEMQQHNMSWIEVQFLQKAVDVLCQCRQTLMYTYVFAYFLKKNNQSIIFEDNQ
KDLENATEQLSEYLERDISSEMLHDIKQKVQDKYRYCESRRKVLLDHVHEGYEKDLWDHF
DTF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgcagagcaatctgctgcaaacgacagacaggatgaagaagaattccattac
aatgtcctgtctgctgacgagattgttaaatttatggttgatactatcaaagaagtgaat
gcagttgttcagattcctgcaactattactagaattttattaaatcattttaaatgggat
aaagaaaaattaatggaaaggtattatgatggtgatcaagaaaggttattttctgaagcc
catgttgtaaatccacataaacgggattcagctagtggtagatctaggcagagagtgact
cgttcaaatgctggaaatgaagaactaatttgtgaaatctgttgtcttggtaaagtttct
gcagacatgacaggtttagaatgtggacataaattctgtgcagaatgttggactgactac
ctcacagctaaaataatggatgaaggtatgggtcagacaatctcctgtgctgcatataac
tgtgatattttagttgatgatgccactgtcatgtccctattaaaagaacccaaagtaaga
ttgaaatatcaacaaattataactaatagctttgtagattgtaataggttattacgatgg
tgtccagcaccagattgtggtcatgtattaaaagttaaatattatgattgtaaacctgta
aagtgttcttgtaaacatattttctgttttgcatgtggtgaaaactggcatgatcctgta
agatgtgtctggttaaagaaatggataaaaaaatgtgatgatgatagtgaaacatctaat
tggattgctgctaatactaaggaatgtcctaaatgtaatgttaccatagaaaaagatgga
ggttgtaatcatattgtatgtaaaaatcataattgtaaagctgatttctgttgggtttgt
ttaggtccctgggaaccacatggatcctcatggtataactgtaatagatataatgaagat
gaagcaagaaaagccagagataatcaagagaaatctaggtcagctttacagagatatctt
ttttactgtaatagatatatgaatcatatgcagagtttaaagtttgaaaacaagttgtat
gcatcagttaaaactaaaatggaagagatgcaacaacacaatatgtcctggattgaagtt
caatttctacaaaaggcagttgatgtattgtgtcaatgtagacaaactttaatgtatacc
tatgtttttgcttacttcctaaagaaaaacaaccaatccattatatttgaggacaaccaa
aaggatttagaaaatgctacagaacagttatcagaatatttagaaagagatatatcatca
gaaatgttacatgatataaaacagaaagtacaagataaatatagatattgtgaaagtaga
cgtaaggtcttattagatcatgtacatgaaggttatgaaaaagatttatgggatcacttt
gatacattttaa
DBGET
integrated database retrieval system
