Lottia gigantea (owl limpet): LOTGIDRAFT_181293
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Entry
LOTGIDRAFT_181293 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K19681
intraflagellar transport protein 52
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgi03037
]
LOTGIDRAFT_181293
Cilium and associated proteins [BR:
lgi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
LOTGIDRAFT_181293
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF4350
OST48_N
DUF4159
Motif
Other DBs
NCBI-GeneID:
20244435
NCBI-ProteinID:
XP_009043996
JGI:
181293
UniProt:
V4BCN1
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MVPTVEGMDDKGQSNTILFNASKREIFSLTNGLKTLNRKLRSTWKLVGNKEEITEEKLSQ
ARVFVTVGPREKFSALEFDAIKKYLENGGSVLILVGEGGESKFDTNINFLLEEYGIMVNS
DAVVRTSYFKYFHPKEALIANGVLNRAISQAAGKTFAVGGEEDTNNAQALSFLYPYGATI
NVIKPSYAVLSTGSVCFPLNRPVCALHTTKASKGKLAVVGSVHMFHDQYIDKEENSKVLD
VLINYLTTDDIRLNVIDAEDPEISDYNQLPDTARLAEELKTCLQESDDIPRDITTLFDNS
LFKLDTSIVPKAIEAYSQLGCKHENLTLITPQFETPLPPLQPATFPPNFRELPPPPLELF
DLDEQFSSEKVRIAQITNKCTDDDLEYYTRECGDILGIIQKLPPDNRDAKHVLEYVLTQV
VEFKKLNQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctacggttgagggaatggatgacaaaggccagagcaacaccattttgttcaat
gcctctaaaagagaaattttttctttgacaaatggattaaaaacattaaacagaaagctc
agatcaacatggaaattagtaggaaataaagaagagataacagaagaaaagttgtcgcaa
gccagagtttttgttacagttggtccaagagagaagttttcagcacttgagtttgatgct
ataaagaaatatttagaaaatggtggaagtgttcttattttggttggagagggtggtgaa
tccaaatttgacacgaacatcaattttctgttagaagaatatggtattatggttaattca
gatgctgtagtgaggacatcatatttcaaatattttcatccaaaagaagctttaatagct
aatggtgtattgaacagggcaataagtcaagcagctgggaaaacattcgcagtgggcgga
gaagaagatactaataatgcacaagctttatcatttttatatccatatggagctactatt
aatgttataaaaccatcatatgctgttctatcaactggtagtgtttgtttccctttaaac
aggccagtttgtgctttacacactacaaaggctagcaaaggtaaactagcagttgttggc
tctgtacacatgtttcatgaccaatatatagataaagaagaaaatagcaaagttcttgat
gtactgattaactatcttactacagatgatatcagattaaatgttatagatgctgaagat
ccagagatatctgattataatcaactaccagatacagctagattagctgaagaattaaaa
acatgtctacaggagagtgatgatattccacgtgatataactacattatttgataattca
ttatttaaattagataccagtatagtacctaaagctatagaagcttatagtcaattagga
tgtaaacatgagaatttaacacttataacaccacagtttgaaacgcccttaccaccttta
caacctgctacattcccaccaaattttcgagagttacccccacctccattagaactattt
gatttagatgaacagttttcatcggaaaaagttagaattgctcaaatcacaaataaatgt
actgatgatgatttagaatattataccagagaatgtggtgatatattaggtataatacag
aaattacctccagataatagagatgctaaacatgtcctggaatatgtcttaacacaagtt
gttgaatttaaaaagttgaatcag
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