Lottia gigantea (owl limpet): LOTGIDRAFT_185236
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Entry
LOTGIDRAFT_185236 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K17908
autophagy-related protein 18
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04136
Autophagy - other
lgi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
LOTGIDRAFT_185236
04136 Autophagy - other
LOTGIDRAFT_185236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_185236
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_185236
Membrane trafficking [BR:
lgi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
LOTGIDRAFT_185236
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
LOTGIDRAFT_185236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
VID27
Med16_N
DUF7165
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_1st
DUF7099
Beta-prop_NWD2_C
Beta-prop_Vps41
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
20244644
NCBI-ProteinID:
XP_009045356
JGI:
185236
UniProt:
V4AIJ2
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MNLASQSGDQQSNLLFVNFNQDCSSLAVGTKTGYKLFSLNSVEKLESIYEHDSEDIAIVE
RLFSSSLVAIVSLSSPRKLEVCHFKKGTEICNYSYSNSILAVKLNRQRLIVCLEESLYIH
NIRDMKVLHTIRDTPPNPTGLCALAISNDNCFLAYPGSNQIGEVQIFDTINLRAVTMIPA
HDGPLAALSFSHQGNKLVTASEKGTVIRVFSIPDGQKLFEFRRGVKRCVSINSLGFSNDA
LFLCASSNTETVHIFKLDINMKDKQTKPQDENQSWMGYFNQALKTSANYLPTPVTEMFNQ
GRSFATARLPNSGLRNVCALALIQKIPRLLVASQDGYLYIYNIDPNEGGECTLIRQHRLD
GQPGESFSQDPASHDRPLAHPGATYTRRDNTPAGGTPPESQPYEELEQGAVGGDEASNMG
KLRLDDENEFPPMTHKSD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgcaagtcaatcgggcgatcaacagtccaatctgttgttcgttaatttcaac
caggactgttcatcgcttgcagttggcaccaaaacaggatacaaactattctctttgaat
tcagttgagaagttagaatctatctatgaacatgatagtgaagatatagccattgtagaa
aggttattctccagcagtctagtggccattgtcagtctttcatcacctcgaaaattagaa
gtttgtcattttaaaaagggaacagaaatatgcaactacagttattccaattctatatta
gctgtcaagctcaatcgacagcgattgattgtatgtttagaagagagtttatatatacac
aatattcgagatatgaaagtgttacatacgatacgtgatacaccacctaatcctacagga
ctttgtgctctggctataagcaatgataattgtttcttggcctaccctggtagtaatcag
attggtgaagtccagatattcgatactattaatttaagagcagttactatgataccagcc
cacgatggtcctttagctgctttaagttttagtcaccaaggtaacaaattagtcacagct
tcagaaaagggaacagtaatcagagttttctctataccagacggtcagaaattatttgaa
tttagaagaggagttaaaaggtgtgttagtattaattcgttagggtttagtaacgatgca
ttgttcctgtgtgcctctagtaatacagaaactgttcatatctttaaattagatatcaat
atgaaagacaaacaaacaaaaccacaagatgaaaatcagagttggatgggatattttaat
caagctttaaaaacctcagctaattatctgcccactcccgttacagagatgtttaaccaa
gggagatcatttgccacggctaggctacctaactcgggcttacgcaatgtctgtgcttta
gccttaatacagaagataccccgattactagtggcgtctcaagatggttatttatatatt
tataatattgatcctaatgaaggtggtgaatgtaccttaatcagacaacataggttagat
gggcagccgggtgaatccttctctcaagatccagcctctcacgatcgtcctctagctcat
ccaggtgccacttatactcgtcgagataacactccagcaggtggcactccgccagaatct
cagccgtatgaagaactagagcagggagctgtgggcggggacgaggccagcaacatggga
aaattacgtttggatgatgaaaatgaatttccacctatgactcataaaagtgattga
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integrated database retrieval system