KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_187016
Entry
LOTGIDRAFT_187016 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K10609  cullin 4
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03420  Nucleotide excision repair
lgi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LOTGIDRAFT_187016
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOTGIDRAFT_187016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_187016
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_187016
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lgi04147]
    LOTGIDRAFT_187016
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     LOTGIDRAFT_187016
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      LOTGIDRAFT_187016
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      LOTGIDRAFT_187016
Exosome [BR:lgi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   LOTGIDRAFT_187016
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HbrB
Other DBs
NCBI-GeneID: 20244728
NCBI-ProteinID: XP_009050443
JGI: 187016
UniProt: V4ANR1
LinkDB
Position
Unknown
AA seq 719 aa
MPDNFQQETWRKLCEAVEAIHKSCSIRYSLEELYQAVENMCSYKMSANLYDQLKVVCESH
VQSCLEQFKAYPFLTDTDNSDYEQFLKKLDYCWQAHCRQMIMIRSIFLFLDRTFVLQNST
ILSIWDMGLDLFRANVISDKVVEGKAVDGLLKLIERERNGEAVNRQLLKSLLRMLSDLQI
YKEAFEKKFLEATDLLYAAEGQQLMQERDVPEYLHHVDKRLNEETERLLHYLDQSTKKPL
ISCVEKQLLEQHLLQILQKGLDNLLQENRIEDLLLLYQLFSRVKNGQKELCTMFAEYIKV
SGRCIVLNNENDADKDKEMVQKLLDFKDKIDNIIDVCFGKSEKFVNVMKESFENFINQRQ
NKPAELIAKYVDSKLKAGNKEATEEELEQLLDKIMVIFRFIHGKDVFEAFYKKDLAKRLL
MSKSASVDAEKSMLSKLKQECGAAFTSKLEGMFKDMELSKDLSLALKPYMQNLDVAGGIE
LTVNILTMGYWPTYQPMEVHLPQEMIRYQEIFKKFYLGKHSGRKLQWQPSLGHCVLKVDF
PSAKKELQVSLFQSLCLLLFNDSTALSYEEIKAATAIEESILKRTLQSLACGKPTLRVLS
KKPKGRDIEDGDKFYFNEEFKHPLFRIRINQVQMKETPEENTSTTEKVFHDRQYQVDAAI
VRIMKTRKTLSHNLLISELYNQLKFPVKPTDLKKRIESLIDRDYMERDKDNPNSYHYVA
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgcctgataattttcaacaagaaacatggagaaagctgtgtgaagccgtggaagctatc
cataagagttgttccattcgatatagtttagaagaattgtatcaggctgtagaaaatatg
tgttcatataagatgtctgcaaacttgtatgatcaactgaaagttgtttgtgaatcacat
gttcaaagctgtttggaacagtttaaagcatatccttttttaactgatactgataattca
gattatgaacagtttttgaagaaactagattattgttggcaagcccactgtagacaaatg
atcatgatcagaagtatatttttgttcctagacaggacatttgtattacagaattctaca
attttgtctatatgggatatgggattagatttatttcgagccaatgtcatcagtgataaa
gttgtagaaggtaaagctgttgatggattgttaaagttaatagaaagagaaagaaatgga
gaagctgttaatcgacaattgttaaaaagtttactacgcatgttgtctgatttacagatt
tataaagaagcatttgaaaagaaatttttggaagccacagatttattgtatgctgcagaa
ggacaacagttaatgcaggaaagagatgttccagaatatttacaccatgttgataagaga
ttaaatgaagaaacagaaagattattacattatttagaccaatcaaccaaaaaacctcta
atatcatgtgttgaaaagcagctactagaacagcatttattacagattttacaaaaaggt
ttggataatttattacaagaaaaccgaatcgaagatttattgttgttatatcaactgttt
tcaagagttaaaaatggtcagaaagagttatgtacaatgtttgctgaatatataaaggtt
tctggaagatgtattgttctcaataatgaaaatgatgctgataaagataaggaaatggtg
cagaaattattagattttaaagataagattgataatataattgacgtatgttttggtaag
agtgagaagtttgtcaatgttatgaaagaaagctttgaaaactttataaatcaacgacag
aataaacctgctgaacttattgcgaaatatgtggacagtaagttgaaagcaggcaataag
gaagctacagaagaagaattagaacaattattagataaaataatggttatattcaggttt
atacatggtaaagatgtatttgaagctttctataagaaagatttagctaagagattatta
atgagtaaaagtgcttccgtggatgctgaaaaatccatgttatccaagttaaaacaagaa
tgtggtgctgcatttactagtaaattagagggaatgtttaaagatatggaattatctaaa
gacttatcactagctctcaaaccttacatgcagaatttagatgtggctggtggtatagaa
ttaacagtaaatatattaactatgggatactggcctacatatcaacctatggaagttcat
ttaccacaagagatgattaggtatcaggaaatatttaagaagttctatcttggtaaacat
agcggaaggaaacttcaatggcagccatcattaggtcactgtgttttaaaggtggatttc
ccctctgctaagaaagaattacaagtgtcactgtttcaatctttatgtctgctattattt
aatgatagtacagcactatcttatgaagaaattaaagctgctacagcaatagaggaaagt
atattaaaaagaactttacagtcattagcttgtggtaaaccaactttaagggtactgagt
aaaaaaccaaagggtagagatatagaagatggtgataaattttattttaatgaagaattc
aaacatcctttatttcgtatacgaattaatcaagtccaaatgaaagaaacgcctgaagag
aatacaagtacaacagaaaaagttttccatgacagacaatatcaagtagatgctgctatt
gtacgaatcatgaaaacaagaaaaactttaagtcataatctattaatatctgaactatat
aatcaacttaaattcccagtcaagccaacagatctgaagaaacgaatagaaagtttgata
gacagagattatatggagcgtgataaagataatccaaatagttatcattacgttgcctaa

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