Lottia gigantea (owl limpet): LOTGIDRAFT_188648
Help
Entry
LOTGIDRAFT_188648 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_188648
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_188648
Spliceosome [BR:
lgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LOTGIDRAFT_188648
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
LOTGIDRAFT_188648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_occluded
HAT_Syf1_CNRKL1_C
LSM_int_assoc
RRM_5
Lsm_interact
RRM_10
Motif
Other DBs
NCBI-GeneID:
20244804
NCBI-ProteinID:
XP_009053877
JGI:
188648
UniProt:
V4AET9
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MESEDFSDSNSSDDDGENDLALELIAQLREKINENPYLYDNHTEIIKLLKSSGELEKLRE
ARENMSKYFPLTAELWLDWIKDEIRMIEDDFKDRDNIYQLFSRAVQDYQSVPLWLEYVQF
AIGGMKDDGGISKMRKIFEEAITVVGLHVTQGSMVWDAYRETENAVLAGLLPAPGSIPTP
EQEESFNVQNQRVSSLFKRQLAVPLLDMEQTYSEYKDWNGGDLDIYTEESYQKSLAHLEK
LKPFEDSLVTAESPYWEEYQTYINFELKGDDPSRIQCIFERSITENCLNPEAWLKYTKYL
DSKLKIKSVILPVYERAVRNCPWSCLLWQRYLLALERHNESGNKLKDVTAKALTSGFTLA
SEYSTIWSTYIDYLRRQINWSEDHTEQLELFRETIEKALENLTEYFGNDGDENGMMRQYW
AVIEGKMCKNMTRAREIWNEIMGLGYGNQANMWLEYYKLERAYGDNKHCRKLLQKALNSV
TDWPESITQAYINFEREEGTLEDYDVAVGRCEAQLDRLTDRKAKAAEKEEVATQQKKQVR
NEKKAQKKFEKKTPKKEVMTPPEKPAKKSPNNKRKLEEPNSTTSSISKQDKADDFRVPPP
PGYKGEPPPNKKQKTEEETTTEGVKHDPSKDDRTVFVSNLNFDINEDGIKEIFCKCGEIS
EIRLVKNFHGKSKGYAYVEFIDELPVTKALELDRQPVHNRPMYVSRCEDRGGGKKKAEFR
FSTDLEKNKLFIKNLPFTCTKDALTTIFSQHGKLKDVRIITYRSGQPKGLAYVEYESEED
AKQAVLKTDGLQIGDHHIEVAISNPPARKQPVIKRDEFIPSLGGGKKESETRGKARTQIA
LLPRAVQKVPVPKKPTRPSASATASKNGGSGDSSAPPTAMSNSDFRNMLLKK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagaagacttttctgattccaacagtagtgatgacgacggtgaaaacgatttg
gctttagagttaattgctcagttacgcgaaaagataaatgaaaatccatacctgtatgat
aaccacacagagataataaaactattaaaatccagtggagaattagaaaagttgagagaa
gctagggaaaatatgagtaaatattttccattgacagcagaactttggttagattggatt
aaagatgaaataagaatgatagaggatgatttcaaggatagagacaacatatatcagtta
ttttctagagctgtacaagattatcaatctgtgcctctgtggttagaatatgttcagttt
gctataggtggtatgaaagatgatggaggtattagtaaaatgaggaagatatttgaagaa
gctataactgttgttggtctacatgttactcaaggttcaatggtatgggatgcttataga
gaaacagaaaatgccgtattggctggattgttgccagcaccaggcagtataccaacacct
gaacaagaagaatcttttaatgtacagaaccaaagagtttcaagtttgtttaaaagacaa
ctagcagtaccattattagatatggaacaaacttacagtgaatataaagactggaatggt
ggagatttagatatttatacagaagaaagttatcaaaaatcattagctcatctcgaaaaa
ttaaaaccttttgaagattctttggtgacagcagaatcaccctattgggaagaatatcag
acctatattaattttgaattaaaaggagatgatccatctagaatacagtgtatatttgag
agatctatcacagaaaactgtttaaatcctgaggcttggttaaaatatactaaatattta
gacagtaaactaaagattaagtcagttatattaccagtatatgaacgagctgtcagaaat
tgtccttggtcttgtttgttatggcagagatatttattggctttagaaagacataatgaa
agtggtaacaaactgaaagatgtaacagccaaagctttaactagtggttttactttagct
agtgaatacagtacgatatggtcaacatatatagattatctgagacgacagatcaactgg
tcagaagatcatacagaacagttggaattatttagggagactattgagaaggctttagaa
aatttaacagaatattttggtaatgatggagatgaaaatggtatgatgagacagtactgg
gctgttatagagggtaaaatgtgtaagaatatgacgagagctagagaaatatggaatgaa
ataatgggattaggatatggtaatcaagctaatatgtggttagaatattacaagctagaa
agggcttatggtgataataaacattgtcgtaaattattacagaaggctttaaactctgtc
acagactggcctgaatctatcacacaggcatacataaactttgaaagagaagaaggtact
ctagaagattatgatgtagctgtaggtcggtgtgaggcacaacttgacagacttacagat
agaaaagccaaggcagctgaaaaagaagaagttgcaactcaacagaagaaacaagtgaga
aatgaaaagaaagctcagaagaaatttgagaaaaaaacaccaaagaaagaggtaatgaca
ccacctgaaaaacctgctaagaaatcacctaacaataaaagaaagcttgaggaaccaaat
agcaccacaagtagtatttcaaagcaggacaaggctgatgatttccgtgttcccccacca
cctggatataaaggtgaacccccaccaaataaaaaacagaaaacagaagaagaaacaaca
actgaaggtgttaaacatgatcctagtaaagatgatagaacagtatttgttagtaattta
aactttgatatcaatgaagatggaattaaggaaatattttgtaagtgtggagagatcagt
gaaattagattagttaagaattttcatggtaaatctaaaggctatgcttatgttgaattt
attgatgaattaccagtaactaaagctttagaattagatagacaaccagtgcacaacaga
ccaatgtatgtctctagatgtgaagataggggtggtggtaaaaagaaagcagaattcagg
ttttctacagatttggaaaagaataagttatttataaaaaatttaccctttacatgtact
aaagatgccttaacaaccatatttagtcagcatggtaaattaaaagatgtaagaattata
acctatagaagtggacaaccaaaaggtttagcttatgttgaatatgagtcagaggaagat
gcaaagcaggctgtattaaaaacagatggtttacagataggtgatcatcatattgaagta
gctattagtaatccaccagctcgtaaacaaccagttattaaacgagatgaattcatacct
tcattagggggtggaaagaaagaatcagaaactcgtggaaaagccagaacacaaattgcg
ttattacctagagcagtccaaaaagtaccagttccgaagaagcctacacgaccatcagca
tcagcaactgcatcaaaaaatggaggttctggtgattcatctgctccaccaacagctatg
tccaattcagactttcgtaacatgttattgaaaaagtaa
DBGET
integrated database retrieval system
