Lottia gigantea (owl limpet): LOTGIDRAFT_190753
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Entry
LOTGIDRAFT_190753 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi03015
mRNA surveillance pathway
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_190753
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_190753
03015 mRNA surveillance pathway
LOTGIDRAFT_190753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_190753
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_190753
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
LOTGIDRAFT_190753
Spliceosome [BR:
lgi03041
]
Common components
Common spliceosomal components
Cap binding complex
LOTGIDRAFT_190753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
TBCA
Motif
Other DBs
NCBI-GeneID:
20244911
NCBI-ProteinID:
XP_009056927
JGI:
190753
UniProt:
V4AG41
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRRESYSDDEDDSSRHKRRRTSDDVNIEDRLDSLITRVGEKSTSSLESNLEGLASVL
EADLPNYKDKIIKILCDCVIYLPEKITVYTTLVGLLNAKNYNCGGEFTELIVRNLKDYLK
TGKFEDARMTVRFIADLVNCHVLVAGSVLQMFDNLIEVTLEDNIPQVRSDFYVYAVLSAL
PYVGRELFEKKEQELNKLLQTIENYISKRHHIHVPSLRVWSSDDPHPQEEYLDCLWAQIK
NLRNNKWMEKQISRPYNAFDSVLCDALQHTLPQIIPPSHNDEIKYPLPMVVFRIFDYTDV
PEGTVLPGSHAIERYLIEEHLQKIIDSNFLERKECAAALLSFPTKNKLPLNYIIIETLFA
ELFNLPKERHLELFYGVLLIELCKLQPSTMPQVLAQATEMLFERIDTMHTICIERFVNWF
SYHLSMFQFRWSWDDWSVCLEQDPNNPKPRFVHEVLHKILRLSYHQRVMESVPESFHCLL
PLKPQPCYKYEQEGAGSLPGTMKAHALMSAIKSKCTPEEAAQILKELPSDMSDDNDLSFN
PLKIDVFVSTLLYLGSKSFSHSFAALAKFHPLLKSLAETEESQIYLLKTLYSVWKSHQQM
LVVLVDKLLRTQIVECSAVANWLFSDSMKQDFISGYLWEIMHSTIKKMSKQVDKLQKEVD
EGRDRLDAQRRRAADGLDMDGYDEDIPTTEMIDRMEEKLESAISQQKSLFLIIFQRFIIL
LTEHLARCESEGIDYNTAWYKWVIERLQQVFLQHHTLVYKYVMTLEELLFTSNIDIHILE
VFQQFCSLRS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcgtcgaagagaatcttacagtgatgatgaagatgattctagccggcataaa
agaagaagaacttcagatgatgtaaacattgaagatagattagattctcttataacaaga
gtcggtgaaaaaagtacatcatcattggaaagtaatttagaaggattagctagtgtattg
gaagctgatttacctaactataaagataagattattaagattctatgtgattgtgtgata
tatttaccagaaaagataactgtttacactacattagttggcttattgaatgcaaaaaat
tataactgtgggggagagtttacagaactaatagtacgaaacttaaaagactatctgaag
actgggaaatttgaagatgctcgtatgactgtaagatttatagctgatctagtcaattgt
catgtattagtagctgggtcagttctacagatgtttgataatttgatagaagttacatta
gaagataatatacctcaggtgcgatcagatttttatgtatatgctgtcctatctgcatta
ccttatgttggaagagaactatttgagaagaaagaacaagaattgaataagttattacag
acaatagaaaattatatcagtaaaagacatcatattcatgtaccttcattacgagtctgg
tcgtcagatgatccacacccacaagaagagtatttagattgtttatgggcacaaattaaa
aatctacgaaataacaaatggatggagaaacagatatcaagaccatataatgcttttgac
agtgtattatgtgatgccctacaacatacattaccccaaataataccaccatcacataac
gatgaaatcaaataccccctacctatggttgtgtttagaatctttgattatactgatgta
ccagagggaacagtcttaccaggaagtcatgctattgaaagatatttaatagaagaacat
cttcagaagattatagattctaactttcttgaaagaaaggaatgtgctgcagctttgtta
agttttccaaccaaaaataaacttccattgaactatatcattattgagacattatttgct
gaattatttaacttacctaaagaaagacatttagagttattttatggtgtattattgata
gaattatgtaaattacaacccagtactatgcctcaagttctggctcaagcaacagagatg
ttatttgaaagaattgacactatgcatacaatttgtattgaaagatttgtgaattggttt
tcgtatcatttgagtatgtttcaatttagatggagttgggatgattggtctgtctgttta
gaacaggatcctaataaccctaaaccaagatttgttcacgaagttcttcataaaatatta
cgactttcttatcatcaacgagtaatggaatcagttccagaatcattccattgtttatta
ccattaaaacctcaaccatgttataaatatgaacaggaaggagcaggaagtttaccaggt
acaatgaaagcacatgctttaatgtcagctataaaatctaaatgtaccccagaagaagca
gctcaaatattaaaagaattaccaagtgacatgagtgatgataatgatttatcatttaat
ccattaaagattgatgtatttgtctccactctgttgtatcttggtagtaaatcatttagt
cattcatttgccgctcttgccaaatttcatccattattaaaatctctggctgaaacagaa
gaaagtcaaatttatttattaaaaacattgtactcagtatggaaatctcatcaacaaatg
ttagtagtattagttgataaattattacgtacacaaatagtagaatgttctgcagtagct
aattggttattctcagattcaatgaaacaagacttcattagtggttatttatgggagata
atgcacagtactatcaagaaaatgagtaaacaagtagataaactacagaaagaagtggat
gaaggcagagatagattagatgctcaaagacgtagggcagcagatggattagatatggat
ggttatgatgaagatattcctacaacagaaatgatcgatagaatggaggagaaattggaa
tcagccattagtcaacagaaaagtttatttctcatcatatttcagaggtttattatttta
ctaacagaacatttagctcgttgtgaatcagaaggtatagattataatacagcgtggtat
aaatgggttatagaaagattacaacaagtctttttacagcaccatactctggtctataaa
tatgttatgacattagaagagttactatttaccagtaatattgatatacatattctagag
gtctttcaacaattctgttctcttagatcttaa
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integrated database retrieval system