KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_191563
Entry
LOTGIDRAFT_191563 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14299  nucleoporin SEH1
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
lgi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_191563
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    LOTGIDRAFT_191563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_191563
   04131 Membrane trafficking [BR:lgi04131]
    LOTGIDRAFT_191563
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     LOTGIDRAFT_191563
Membrane trafficking [BR:lgi04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    LOTGIDRAFT_191563
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 20244939
NCBI-ProteinID: XP_009058341
JGI: 191563
UniProt: V4A2Z3
LinkDB
Position
Unknown
AA seq 359 aa
MFETNPFPASHEDLIHDVKYDFHGKRKATCSSDHSVKIWDCDEKGQWHCSANWKAHSGSV
WRVTWCHPEYGQVIATCSFDRTAAVWEELIGEHARQNKQSHWVKRTSLVDSRTSVTDVKF
APRHLGLQLATCSADCVVRIYEAHDVMNLSQWSLQHEIQCSLSCSCLAWNPSLSRSHPPM
ICVGSDNPSTTAGGKVQIYEYSDSNRKWRKLEIISIVTDPVHDLEFAPNLGRSYHLLAVA
SKDLNLFSIKPLSSSLKDSANISKFDIQRLGEFTEHKSQVWRISWNVFGTVLTSSGDDGC
VRLWKANYMGIWKCVQVLEDGSRKAVASYETKTVPVTSNNSVRYYHIKPVANASQAIWH
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtttgaaacaaacccatttccagcttcacatgaagatttgattcatgatgtaaagtat
gatttccatggtaaaagaaaagctacttgttcaagtgaccacagtgtaaagatatgggat
tgtgatgaaaagggacagtggcactgctcagctaattggaaggctcacagtggatctgtt
tggagagtgacatggtgtcatccggaatacggacaagttattgctacgtgttcatttgat
agaacagcagctgtatgggaagaattgattggagaacatgcaagacaaaataaacaatca
cactgggttaaaagaaccagtttagttgacagtagaacatcagttacagatgtcaagttt
gccccaagacatttaggcttacaattggcaacatgttctgctgattgtgtagtgagaatc
tatgaagcacatgatgtgatgaatttaagtcagtggtctttacaacatgaaatacaatgt
agtttgagttgtagttgtttggcatggaatccatctttatctagatcccatcctcctatg
atatgtgttggaagtgataatccaagcacaacagctggtggtaaagtacagatatatgaa
tacagtgattctaatagaaaatggaggaaattagaaataatttcaatagtaaccgatcca
gtacatgatttagaattcgctcctaatttaggacgatcatatcatttattagcagtagct
tctaaagacttaaatttattcagtataaaaccattgagttccagtttaaaagattcagca
aatatcagtaagtttgatatacaacgtttaggcgaattcacagaacataaatcacaggta
tggagaataagttggaatgtatttggtactgtattaacttcatcaggggatgatggttgt
gttagattatggaaagctaattatatgggtatttggaagtgtgtacaagtcttggaggat
ggcagtagaaaggcggtagcatcatatgaaacgaaaacagttccagttacatccaataat
agtgtcaggtactatcatattaaaccagtagctaatgccagtcaggctatttggcactaa

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