Lottia gigantea (owl limpet): LOTGIDRAFT_191563
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Entry
LOTGIDRAFT_191563 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_191563
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
LOTGIDRAFT_191563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_191563
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_191563
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LOTGIDRAFT_191563
Membrane trafficking [BR:
lgi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
LOTGIDRAFT_191563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
20244939
NCBI-ProteinID:
XP_009058341
JGI:
191563
UniProt:
V4A2Z3
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MFETNPFPASHEDLIHDVKYDFHGKRKATCSSDHSVKIWDCDEKGQWHCSANWKAHSGSV
WRVTWCHPEYGQVIATCSFDRTAAVWEELIGEHARQNKQSHWVKRTSLVDSRTSVTDVKF
APRHLGLQLATCSADCVVRIYEAHDVMNLSQWSLQHEIQCSLSCSCLAWNPSLSRSHPPM
ICVGSDNPSTTAGGKVQIYEYSDSNRKWRKLEIISIVTDPVHDLEFAPNLGRSYHLLAVA
SKDLNLFSIKPLSSSLKDSANISKFDIQRLGEFTEHKSQVWRISWNVFGTVLTSSGDDGC
VRLWKANYMGIWKCVQVLEDGSRKAVASYETKTVPVTSNNSVRYYHIKPVANASQAIWH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaacaaacccatttccagcttcacatgaagatttgattcatgatgtaaagtat
gatttccatggtaaaagaaaagctacttgttcaagtgaccacagtgtaaagatatgggat
tgtgatgaaaagggacagtggcactgctcagctaattggaaggctcacagtggatctgtt
tggagagtgacatggtgtcatccggaatacggacaagttattgctacgtgttcatttgat
agaacagcagctgtatgggaagaattgattggagaacatgcaagacaaaataaacaatca
cactgggttaaaagaaccagtttagttgacagtagaacatcagttacagatgtcaagttt
gccccaagacatttaggcttacaattggcaacatgttctgctgattgtgtagtgagaatc
tatgaagcacatgatgtgatgaatttaagtcagtggtctttacaacatgaaatacaatgt
agtttgagttgtagttgtttggcatggaatccatctttatctagatcccatcctcctatg
atatgtgttggaagtgataatccaagcacaacagctggtggtaaagtacagatatatgaa
tacagtgattctaatagaaaatggaggaaattagaaataatttcaatagtaaccgatcca
gtacatgatttagaattcgctcctaatttaggacgatcatatcatttattagcagtagct
tctaaagacttaaatttattcagtataaaaccattgagttccagtttaaaagattcagca
aatatcagtaagtttgatatacaacgtttaggcgaattcacagaacataaatcacaggta
tggagaataagttggaatgtatttggtactgtattaacttcatcaggggatgatggttgt
gttagattatggaaagctaattatatgggtatttggaagtgtgtacaagtcttggaggat
ggcagtagaaaggcggtagcatcatatgaaacgaaaacagttccagttacatccaataat
agtgtcaggtactatcatattaaaccagtagctaatgccagtcaggctatttggcactaa
DBGET
integrated database retrieval system