Lottia gigantea (owl limpet): LOTGIDRAFT_192964
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Entry
LOTGIDRAFT_192964 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_192964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_192964
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LOTGIDRAFT_192964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
20245006
NCBI-ProteinID:
XP_009059832
JGI:
192964
UniProt:
V4A866
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MAMAVSLPQIYGDERDAIIAKWNQLQAFWGTGKGLYNQNGVVEFKADNPFCRFKAIGYNA
IKGVEKNTDGLIIITLKKKHSEVCKVQQQIVDVLHRILGSKPTLSVCVEGSKPLPDDKTE
LIFYVIERPASGPARRVPASELFSFLSQPSQKNSLINELTVDSILPKMELSVDQLKDYLD
TPPAGIDPLLWQQAKLDNPNPEEYVPVPMIGFKEVQQRLKYQEQQTSLHQQRIDEMGEDL
SELQNKHSNMLAKLEEYKRKHLELGHRLLQVIVKQEVYRKMGYAIQAEEEHTKVQLEAIQ
AELNHPTQFKGRLNELMSQIRMQNHLFTNRPDVNYHMDIELQHEMKQLLKQQQEGLEHLI
QIIKDDSQDLDLIEQGLLKKTVR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggctgtgtcacttcctcagatctatggagatgaacgtgatgccataatcgct
aaatggaaccaactgcaggccttctgggggacaggaaagggtttatataatcaaaatggc
gtggtggaattcaaggcagataacccattctgtagatttaaggctataggctataatgct
ataaaaggagtagaaaagaacactgatggtttgataatcataactttaaaaaagaaacat
tcggaagtgtgtaaagtccaacaacaaattgtggatgtcctgcataggatattgggtagt
aaaccaacgttgtctgtttgtgtggaaggcagcaagcctttaccagatgataaaactgaa
ttaatattctacgtaatagaaagacccgcctcaggtccagctagacgtgttccagcatcg
gaattattttcatttttaagtcagccttcccagaaaaacagtctaatcaatgagctcact
gtagacagcattttaccgaaaatggaattatcagtggatcagttgaaagattatttagac
accccaccagcaggcattgatccgttactatggcaacaagcaaagctagataacccgaat
cctgaagagtatgttccagttccaatgattggatttaaagaagttcaacagagattgaaa
tatcaggaacaacagacctctcttcatcaacaacgtattgatgaaatgggggaagatctg
agtgagttacagaataaacacagtaatatgttagccaaactagaagagtataaacgaaaa
catttagaactgggtcatcgcctcttacaggttatagtgaaacaagaagtttatcgtaaa
atgggatatgctatacaagctgaagaagaacataccaaggttcaactagaagctatacaa
gctgagctcaatcaccctacacagtttaagggccgtctgaatgagttgatgtctcagata
agaatgcagaaccatctgtttaccaacagaccagacgtcaattatcatatggatatagag
ttacaacatgaaatgaaacagttattaaaacagcaacaagaaggtttagaacatttaata
caaattattaaagatgatagccaggatttagatttaatagaacagggtcttctgaagaaa
acagttcgatga
DBGET
integrated database retrieval system