Lottia gigantea (owl limpet): LOTGIDRAFT_195636
Help
Entry
LOTGIDRAFT_195636 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOTGIDRAFT_195636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_195636
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOTGIDRAFT_195636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
TPR_HPS5_insect
DUF7659
Motif
Other DBs
NCBI-GeneID:
20245141
NCBI-ProteinID:
XP_009063476
JGI:
195636
UniProt:
V3ZN41
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAVQPKQELQLDFSQEQGFLAFHRDLPEKPSTTLRVFDRTDYYTVHGQDAIFVAKEVFKT
TGVVKYLGGGTKKLESVVLSKMNFESLMRDLLLVQQYRVEVYRNKGSSKNNDWILALKAS
PGNLSQFEDILFTNNEMAGSIGVIGIKVSTDNGQKIVGIGYADATVRKFSVCEFTDNDQF
SNLEALLVQLGPKECVIGTGELNTESGKFKQVLDRSNILITERKKSEFNCKDVIQDMNRL
LKKKKGEQSNSATLSEMDRVHAVSALSAVIKYLELLSDESNFGQYQLTTFDLKQYMRLDS
AAVRALNILPNPNEGGNKNQSVLGLLNKCRTAQGQRLIAQWVKQPLMDKNKIEERLNVVE
AMLENTELRQTLQEEQLRRIPDFQKLAKKFQRKKATLQDCYRVYQAIDKMPYLLEILEKH
DGNHRTLLMELFSNPLKELLMDFAKFQEMVETTMDLNQVENHEYVIKSDFDENLAALREK
IDALESDIKSQINKVARDLNLEANKTLKLESNNQLGYFFRVTRKDEKALRNNKNYRTIDT
NKNGVRFRNSAVSKYNEDYLKYKEEYNEQQKSVVSEIIEIAAGYVEPMLIINDVVAQLDV
LASFSHVSSSAPIHGILKLKEARHPCLEMQDDVSFIPNDAMFEKAEKMFHIITGPNMGGK
STYIRSVGVVVLMAQLGCFVPCSSADITIVDSILARVGAGDSQLKGVSTFMAEMLETASI
LRSATEKSLIIIDELGRGTSTYDGFGLAWAISEHIATKIKPFCLFATHFHELTALSDVVS
SVNNLHVTALTTNNTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVIEFAKEKARELEDFQ
CVNLQGTDLYGDDEPAVKKRKLVKEEGEEIIEKFLNTVKKLPIDTMSDTDLQKEMEKLKA
EVKAKNNPYVNDILAKTPMSS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaaccaaaacaagaattgcaattagatttttctcaagagcaaggtttcttg
gcatttcacagagatttaccagagaaaccaagcacaaccttacgagtttttgatagaact
gattattatacagtacatggacaagatgctatatttgtggccaaagaagtttttaaaaca
actggtgtggttaaatatttgggtggtggaactaagaagttggagtctgttgttctcagt
aagatgaattttgaatcattaatgagagatttgttattagtacaacagtatagagtggag
gtctatagaaataaaggttctagtaaaaacaatgattggatactagcattgaaggcatca
cctggtaacctcagtcaatttgaagatatattatttactaataatgagatggctggatca
atcggtgttattggtattaaggtttctactgataatggacaaaaaattgtaggtattggc
tatgcagatgctactgtaagaaaatttagtgtgtgtgaatttactgacaatgatcagttc
tcaaacttagaggcattattagtacaactaggtcctaaagaatgtgttattggcactggt
gaactcaatacagaatctggtaaatttaaacaagtactagatagaagtaatatactaatt
actgaaagaaaaaaaagtgaatttaattgtaaagatgtaatacaagatatgaatagatta
ttgaagaagaaaaaaggagaacaatcaaatagtgctaccttatctgaaatggaccgagtt
catgcagtttcagcattatctgctgttattaaatatttggagctgctatcagatgagagt
aattttggacaatatcagttaacgacctttgaccttaaacaatatatgaggttagattca
gctgctgtgagagcattgaatatattacctaatcctaatgaaggtggtaataagaatcaa
agtgttttaggtttattgaataaatgtcgtacagctcaaggtcaaagattaatagctcaa
tgggtaaaacaacctttaatggataaaaataaaatagaggaaagattaaatgtagtagaa
gctatgttagaaaatacggaattgagacaaacattacaagaagaacaattacgaagaatt
cctgattttcaaaaacttgcaaaaaaatttcaacggaagaaggcaaccttgcaggattgt
tatagagtgtaccaagctatagataaaatgccatatttattagaaatattagagaaacat
gatggaaaccatagaacattattaatggagttgttctctaatccactgaaggaattactg
atggactttgctaagtttcaagaaatggtagaaacaacaatggatttaaatcaagttgaa
aatcatgaatatgtcattaagtctgactttgatgaaaatttggctgctttaagagaaaaa
atagatgccctagaatctgatattaaatcacaaataaacaaagtagcaagagatctgaac
cttgaagctaataaaacattaaagttagaaagtaacaatcaattaggttactttttcaga
gtaactagaaaagatgaaaaagcactgcgtaataataagaactatagaactattgatact
aataaaaatggtgtcagatttcggaattcagctgtcagtaaatataatgaagattatcta
aaatataaagaagaatataatgaacaacagaagagtgtagttagtgagattattgaaata
gcagctggttatgttgaacctatgttaataatcaatgatgttgtggcacagttagatgta
ttagctagcttttctcatgtatcatccagtgcaccaattcatggaatattaaagctaaaa
gaagccagacatccttgtttagaaatgcaagatgatgtatcattcattcctaatgatgct
atgtttgaaaaagctgagaaaatgttccacataataacaggacctaatatgggaggaaaa
tcaacttatatcagatcagtaggtgttgtggttttaatggcacagttaggatgttttgta
ccctgttcctcagctgatataacaatagtagatagtatattagctagagttggtgctggt
gatagtcaattaaaaggggtatctacgtttatggcagaaatgttagaaacagcttcaata
ctcagatctgctacagagaaatcactaattattatagatgaattaggacgtggtacttca
acttatgatggatttggtttagcatgggctatatcagaacatatagctaccaaaataaaa
ccattttgtttgtttgctactcactttcatgaattaacagctctatctgatgttgttagt
agtgtcaacaatctacatgttacagctttaacaacaaataatacattaacattattatat
agagtaaaaccaggtgtatgtgaccagagttttggtatacatgttgccgaactagctcat
tttcctaaacatgtcatagagtttgccaaagaaaaagccagagaattagaagattttcag
tgcgttaatttacaaggtacagatttatatggtgatgatgaaccagctgttaaaaaacgt
aaattagtcaaagaggaaggtgaagaaataatagagaagtttttaaatactgtgaagaaa
ttaccaatagatactatgtcagatactgatcttcagaaagaaatggaaaaacttaaagct
gaagtcaaggctaaaaataacccatatgttaatgatattttagccaagactccaatgtca
tcatga
DBGET
integrated database retrieval system
