Lottia gigantea (owl limpet): LOTGIDRAFT_196113
Help
Entry
LOTGIDRAFT_196113 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_196113
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_196113
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_196113
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_196113
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_196113
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
LOTGIDRAFT_196113
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
LOTGIDRAFT_196113
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LOTGIDRAFT_196113
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LOTGIDRAFT_196113
Spliceosome [BR:
lgi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
LOTGIDRAFT_196113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
20245169
NCBI-ProteinID:
XP_009064257
JGI:
196113
UniProt:
V3ZVZ0
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPERMTGPGDSAEIDVDAIIEHLLSVRNSPNKQVQLPETKIRQLCQLSREIFMEQPMLLE
LEAPVNICGDIHGQYEDLLRHFDGCGYPPDSNYLFLGDYVDRGKHSLETICLILAYKIKY
PNNFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNALPIAALVEGTILCMHG
GLSPDLSDLQQIQEIERPLDVPDQGLICDLLWSDPDEDITGWGENDRGVSYTFGRDIVKD
CLKKFSCSLIARAHQVVEDGYQFFQKRKLVTLFSAPNYCGEFDNAGAVMIVAQDLTCSFK
ILPPDKMKSIAAQGKKKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaggatgactggaccgggagacagtgcagaaatcgacgtcgatgccatcatt
gaacatcttctgtctgttcgaaattctccaaataaacaagttcaacttccagagaccaaa
atccgacagctttgtcagttgtcgagggaaatattcatggaacagccaatgctactggaa
ttagaagctccagtcaatatttgtggcgatatccatggacagtatgaagatttgttgaga
cattttgatgggtgtggctacccaccagattcaaattatttatttcttggagattatgtt
gacagaggaaaacattccttagaaactatttgtttgatacttgcatataagatcaaatac
ccaaacaatttctttttattgagagggaatcatgaatgtgcttccatcaatagaatttat
ggattttatgatgaatgtaaaagaagatacaatatcaaactttggaagacatttacagac
tgtttcaatgccttaccaatagcagcattagttgaagggaccatattgtgtatgcatggt
ggattatctccagatttgtctgacttgcaacaaattcaagaaattgaacgtccacttgat
gttccagaccaaggattgatttgtgatttattgtggtcagatccagatgaagatataact
ggctggggtgaaaatgacagaggtgtatcctatacttttggtcgtgatattgtcaaagat
tgtctcaagaaattttcatgcagtctgattgctagagctcaccaagttgttgaagatggg
tatcagttttttcagaaaagaaagctggtcacattgtttagtgctcctaattattgtgga
gagtttgataatgctggggctgtgatgattgtagctcaagatctaacctgttcatttaaa
atcctgcctcctgacaagatgaaatctattgctgctcaaggaaagaagaaaaagtaa
DBGET
integrated database retrieval system