Lottia gigantea (owl limpet): LOTGIDRAFT_198206
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Entry
LOTGIDRAFT_198206 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03030
DNA replication
lgi03410
Base excision repair
lgi03420
Nucleotide excision repair
lgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOTGIDRAFT_198206
03410 Base excision repair
LOTGIDRAFT_198206
03420 Nucleotide excision repair
LOTGIDRAFT_198206
03430 Mismatch repair
LOTGIDRAFT_198206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgi03032
]
LOTGIDRAFT_198206
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_198206
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_198206
DNA replication proteins [BR:
lgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LOTGIDRAFT_198206
DNA Replication Termination Factors
ELG1-RFC complex
LOTGIDRAFT_198206
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LOTGIDRAFT_198206
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LOTGIDRAFT_198206
Check point factors
HRAD17(Rad24)-RFC complex
LOTGIDRAFT_198206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_11
AAA_22
AAA_24
AAA_16
AAA_30
Mg_chelatase
SLFN-g3_helicase
AAA_14
Gp44_lid
AAA_5
AAA_19
RuvB_N
DUF815
AAA_28
ATPase_2
AAA_7
AAA_3
Cdc6_lid
Effector_1
Motif
Other DBs
NCBI-GeneID:
20245290
NCBI-ProteinID:
XP_009067161
JGI:
198206
UniProt:
V3YVV6
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MQAFLKGGTTSLQKTKDKASSSSKDTKDTKKHIPWVERYRPRCVDDVAFQDEVVLVLKKS
LTGSDLPNLLFYGPPGTGKTSTILAAARELYGPELMRSRILELNASDERGIDVVRVKVKK
FSQQTASGTRSDGKPCPPFKIVILDEADSMTSHAQAALRRTMEKQSKTTRFCLICNYVSR
IIEPITSRCAKFRFKPLAENVLSDRLKLISEKENITCSDEVIKALIDTSEGDLRKAITYL
QSASSLHKDDTDITVEDICEIAGVIPTDNIDEVLKICHSDSYEKLDKIIKTMINNGYAAT
QVINQIHDRIVISEELTDTQKSVICEKIALVDKCLLDGADEYLQLMALFSVIMTQICHGK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttttgaaaggaggaaccacttctttacagaagactaaagacaaagccagt
agttctagtaaagatacaaaggacaccaagaaacacataccatgggtggaaagatatcga
ccaagatgtgtagatgatgttgcttttcaagatgaagtggttttagttctgaagaaatct
ttgacaggttctgatttacctaatctgttattctatggtccacctggtactggtaaaaca
tcaactatactcgctgctgctagagaattatatgggcctgagttaatgagatctaggata
ctagagttaaacgcctctgatgaaagaggtatagatgttgtcagagttaaagtcaagaaa
ttctctcaacaaacagcttcaggcactagatcagatggtaaaccatgtcccccatttaaa
atagttatattagatgaagctgactccatgacatcacatgcacaggcagccttgagacga
acaatggagaaacagtctaaaactacgagattctgtttaatttgtaattatgttagccgt
attatagagcctatcacatcacgatgtgctaaattcagatttaaaccactagctgaaaat
gttcttagtgatagattgaaacttattagtgagaaggagaacattacctgtagtgatgag
gtgatcaaggcattaatcgatacatcagaaggtgatttaagaaaagctataacttattta
caaagtgcttcgtccttacataaagatgatacagatataacagttgaagatatctgtgaa
atagctggggttatacctacagataatatagatgaagttttgaaaatttgtcattctgat
tcctatgaaaaattggataaaattattaagactatgattaataatggatatgctgctaca
caagttataaatcaaatacacgatagaatagttatatccgaagaacttacggacactcaa
aaatctgtcatctgtgaaaaaatagcgcttgtggataaatgtctactagatggagcagat
gaatatcttcaacttatggctttattcagtgtcataatgactcaaatatgccatggcaaa
tga
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