Lottia gigantea (owl limpet): LOTGIDRAFT_198301
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Entry
LOTGIDRAFT_198301 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K07374
tubulin alpha
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04145
Phagosome
lgi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
LOTGIDRAFT_198301
09142 Cell motility
04814 Motor proteins
LOTGIDRAFT_198301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_198301
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_198301
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgi04812
]
LOTGIDRAFT_198301
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_198301
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOTGIDRAFT_198301
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
LOTGIDRAFT_198301
Cytoskeleton proteins [BR:
lgi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
LOTGIDRAFT_198301
Exosome [BR:
lgi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LOTGIDRAFT_198301
Exosomal proteins of other body fluids (saliva and urine)
LOTGIDRAFT_198301
Exosomal proteins of colorectal cancer cells
LOTGIDRAFT_198301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
20245297
NCBI-ProteinID:
XP_009067257
JGI:
198301
UniProt:
V3YVS3
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFAETGAGK
HVPRAVFVDLEPTVVDEVRTSVYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPHISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIFDICRRNLDIERPSYNNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVADITNACFEPCN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGLDDQAGDEEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgtatctctatccatgtcggtcaagctggagtccagatgggcaatgcctgt
tgggagttgtactgtttagaacatggtatccaacctgatggtcagatgccttctgataaa
actattggaggtggggatgattccttcaacactttctttgctgaaactggggctggtaaa
catgtaccaagagctgtctttgttgatttggaaccaactgttgtggatgaggttcggacc
agcgtttatcgtcaactcttccacccagaacaacttattactggtaaagaagatgctgcc
aacaactacgccagaggtcactatactgttgggaaagaactcattgacttagtccttgac
agaattaggaagctggctgatcaatgtactggtcttcaaggtttcttgatcttccattcc
ttcggtggtggaaccggatctggtttctcatccctccttatggaaagattgagtgtcgac
tatggcaaaaaatccaagttagaatttgccatttacccagctccccatatatccactgca
gtggtagaaccatacaactctatcttaactacacatacaacattagaacattctgattgc
gctttcatggtggataatgaggccatctttgatatctgtcgaagaaacttggatattgaa
cgcccgtcctacaacaacctaaatcggttgattggtcaaatcgtcagttcgatcactgcc
tccctccgatttgatggtgctttgaatgtggatcttactgagttccagaccaacttggta
ccttacccgcggatccattttccattggttacgtatgctccagttatctcagccgagaaa
gcttaccatgaacagctctcagttgctgatatcacgaacgcctgttttgagccatgtaat
cagatggtcaaatgtgatcctcgtcatggtaaatacatggcttgttgtatgttgtaccga
ggtgatgttgttccaaaggatgtgaatgctgccattgctaccatcaagaccaagagaacc
atccaattcgtcgactggtgtccaactggtttcaaggtcggtatcaattaccaaccacca
actgttgtaccgggaggggatttagccaaagtacagagagctgtttgtatgttgagcaac
accactgctattgctgaagcttgggctcgtcttgatcataaatttgatcttatgtacgcc
aagagagctttcgttcattggtatgtaggtgaaggtatggaagaaggtgagttctccgaa
gccagggaagatttggcggcgctagagaaagattatgaggaagttggtctggatgatcag
gcaggagatgaagaggagggagaagaatattaa
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