Lottia gigantea (owl limpet): LOTGIDRAFT_200201
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Entry
LOTGIDRAFT_200201 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_200201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_200201
03012 Translation factors [BR:
lgi03012
]
LOTGIDRAFT_200201
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LOTGIDRAFT_200201
Translation factors [BR:
lgi03012
]
Eukaryotic type
Release factors
LOTGIDRAFT_200201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
LPD34
Motif
Other DBs
NCBI-GeneID:
20245393
NCBI-ProteinID:
XP_009047697
JGI:
200201
UniProt:
V4AW16
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MVDKRTLEKYEREAKEKNRESWYLSWALDTNSEEREKGKTVEVGRAFFETDKKHFTILDA
PGHKSFVPNMIGGASQADLAILVISARRGEFETGFDRGGQTREHAMLVKTAGVKHLVVLI
NKMDDPTVNWAEERFNECKEKLLPYLKKCGFNPKTDIVFMPCSGLTGAFLKDKVDEAICP
WYQGPSLLTFLDDYAPLARDKDAPVRVPIADRYKDMGTIVLGKIESGVVSKNLQLLLMPN
KQMVKVTQIWSDEDDADEAWPGENVKLKLGGVEEDDVSQGFVLCSPNSLCHTSKNFYAQI
VILECKSIICAGYSCVLHIHSCSEEATITGLKCLLDKKTGKKAQAGPKFIKQDQVGIASI
EINGGRICLETFKDFPQMGRFTLRDEGRTIAIGKVLKLLD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaacgtactttggaaaagtatgaaagagaagcgaaggaaaagaacagagaa
tcttggtacttatcttgggctttggataccaactctgaagagagagaaaagggaaaaact
gttgaagttggtagagcattctttgaaacagacaagaaacattttactattcttgatgca
cctggtcacaaaagttttgtcccaaatatgataggtggtgcatctcaagcagatttagct
attttagtcatatctgctcgaagaggagaatttgagactgggtttgatagaggtggccaa
acaagagaacatgctatgttggtgaaaactgcaggagtaaaacatttagtggtattgatt
aataaaatggatgatccaacagttaactgggctgaagaaaggttcaatgaatgtaaagaa
aagctactaccatacctaaagaaatgtgggtttaatcccaagacagatattgttttcatg
ccttgttcaggattaacaggagcattcttgaaagataaagttgatgaagctatatgccct
tggtatcaaggaccatctcttcttacattcttagatgattatgcacctttagctagagac
aaagatgctcctgttagagttcctattgctgatcgatacaaagatatgggaactattgta
ttgggcaaaattgaatctggagttgtgtcaaaaaatcttcagttgttgcttatgcctaac
aagcagatggttaaagtcacccagatctggtctgatgaagatgatgctgatgaagcttgg
ccaggagaaaatgtcaagttgaaacttggtggagtagaagaagatgatgtttctcaagga
tttgttctttgttcgccaaatagtctgtgccatacctccaaaaatttttatgctcagatt
gttatattagagtgtaaatcaattatctgtgctggctatagctgtgttttacacattcac
tcttgttctgaagaagctactattacaggacttaaatgccttttagacaagaaaactggt
aaaaaggctcaagctggacccaaatttatcaaacaagaccaagttggaattgcaagtata
gaaatcaatggtggtaggatttgcttagaaacctttaaagactttccacaaatgggacga
tttactctgcgagatgaaggcagaacgattgcgattggaaaagtgctaaaactcttagat
taa
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