Lottia gigantea (owl limpet): LOTGIDRAFT_202604
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Entry
LOTGIDRAFT_202604 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_202604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_202604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_202604
Membrane trafficking [BR:
lgi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
LOTGIDRAFT_202604
Exosome [BR:
lgi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LOTGIDRAFT_202604
Exosomal proteins of colorectal cancer cells
LOTGIDRAFT_202604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BBL5
HEAT_EF3_GNC1
DUF5847
WHD_Rad26_CSB
FaeA
DUF5424
Motif
Other DBs
NCBI-GeneID:
20245541
NCBI-ProteinID:
XP_009056821
JGI:
202604
UniProt:
V3ZMA0
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDRFEWSDGSLMNGEVHIDQQRGVGIYDGHDKTSFDYGMLSVTSHRIIWRDHRNRNSVIS
LPLLSVIYLEEQPSGFAKSAKIIVHLSAAPSNKSAGPSTYSAHSYIRLSFRESGEHDILR
SLDEALQAKKWEQTSAPLSQTGTVIKDPFSARHRPGIVGIERSIQQKNTHTNKQISVAFE
DLNKLIQQAKEMVSLTKSIATKIKEKQGDITENETRKFKSYLLSMGIPNPVTRETHGTGD
KYYTELARQLSTVLTKPVEESGGMMTLTDVYCRVNRARGMELLSPEDLLHACELMEVLNL
PIRLRTFDSGVLVLQSKSQDEEQVIAHTTNYVGENGNCTAEELAQCLGVSVLLAKERLLL
TEKVGGVCRDETIEALRFFPNLFLTRPA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttttgagtggtcggacggttccctgatgaatggtgaggttcatattgatcaa
caaagaggtgtaggaatttacgacggtcatgacaagacatcttttgattatgggatgttg
agtgtcacaagtcatagaataatttggagagatcacagaaacaggaattctgtgatatca
ttaccattgttgtctgttatttatcttgaagaacaaccgtcaggatttgctaaaagtgct
aagataattgtacatctgagtgctgcaccaagtaacaaatcagctggtccctcgacttac
agcgcccacagttatattagactgtcttttagagagtctggagaacacgacatattaaga
agtttagatgaagctctacaagccaagaaatgggaacaaacatcagcaccactatctcaa
actggaactgtgattaaagatccattttcggctcgtcaccgtcctggtatcgtaggaatt
gaaagatcaattcaacagaaaaacacccacactaataaacaaatctctgtggctttcgaa
gatttaaataaactcatacaacaggccaaggaaatggtgtcgttaactaaaagtatcgcc
actaaaataaaagagaaacagggtgatatcacagagaatgagactagaaaatttaaatca
tatttattgtctatgggtatcccgaatcctgttaccagggaaacgcacggtactggagat
aaatactatacagaactagctcgacaactttctacagttcttactaaacctgtcgaggag
agtggaggtatgatgactctaactgatgtttattgtagagtcaacagagccagaggcatg
gagttattgtcccctgaagatctactacatgcctgtgaattgatggaagttttaaattta
cccatcagattgcgtacgtttgatagtggtgtcttggttttacaaagtaagagtcaagat
gaagaacaagtcatagcacacactactaactacgttggagagaatggaaattgtacagca
gaagaactagctcaatgtctcggtgtttctgttttactcgccaaggaaagattattatta
accgagaaagtgggtggtgtttgtcgagatgaaactatcgaagctctccgatttttccca
aatttatttctaactagacctgcctag
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