Lottia gigantea (owl limpet): LOTGIDRAFT_205756
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Entry
LOTGIDRAFT_205756 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03082
ATP-dependent chromatin remodeling
lgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LOTGIDRAFT_205756
03083 Polycomb repressive complex
LOTGIDRAFT_205756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_205756
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
LOTGIDRAFT_205756
Histone modification proteins
HAT complexes
HATB complex
LOTGIDRAFT_205756
HDAC complexes
Sin3A-HDAC complex
LOTGIDRAFT_205756
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
LOTGIDRAFT_205756
PRC2.2
LOTGIDRAFT_205756
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
LOTGIDRAFT_205756
Heterochromatin formation proteins
Other heterochromatin formation proteins
LOTGIDRAFT_205756
Chromatin remodeling factors
NuRD complex
LOTGIDRAFT_205756
NuRF complex
LOTGIDRAFT_205756
NuRF complex (fruit fly)
LOTGIDRAFT_205756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_RIG_1st
eIF2A
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
20245863
NCBI-ProteinID:
XP_009060217
JGI:
205756
UniProt:
V4BKR5
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MTEKEEGAVISEGYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVS
RPSDKDYSLHRLILGTHTSDEQNHLLIASVQLPNDNVQFDASHYDSEKGEFGGFGSVSGK
IEIEIKINHEGEVNRARSMPQNPFIIATKTPSCDVLLFDYSKHPSKPDPSGECHPELRLK
GHQKEGYGLSWNPNLNGHLLSASDDHTICLWDVNAGTKDSKTVDAHTIFTGHTSVVEDVA
WHLLHESLFGSVADDQKLMIWDTRSNNPNKPSHTVDAHTAEVNCLSFNPYSEFILASGSA
DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ
SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEP
DTPASDLEQTAS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaggaagaaggagcagtgatatcagaagggtatgatgatgctgtcgaagaa
cgagttataaatgaagaatacaaaatatggaagaaaaacaccccttttctttatgatttg
gtcatgacgcatgccttagaatggccaagtttgacagctcagtggttacctgatgtttca
agaccaagtgataaagattattccctacacagactgattttaggcacacacacatctgat
gaacagaatcatttattgatagctagcgtacaattacctaatgataatgttcaatttgat
gcttcacattatgacagtgaaaagggagaatttggtggatttggatctgttagtggtaaa
attgaaatagagataaaaataaaccatgaaggtgaagtgaatagagccagatccatgcca
cagaatccatttatcattgctacaaaaacaccatcttgtgatgtcctgttatttgactac
tcaaaacacccttcaaaaccagatcctagtggtgagtgtcaccctgaattaagattgaaa
ggacatcagaaagaaggttatggtctgtcatggaatcctaatttaaatggacatttatta
agtgcttcagatgatcatacaatatgtttatgggacgtgaatgctggaactaaagatagt
aaaacagttgatgctcatacaatatttactggtcatacatcagttgtagaggatgttgca
tggcatttattacatgaaagtttatttggttctgttgctgatgatcagaaattaatgatt
tgggatacaagatcaaacaaccctaataaacccagtcatacagtagatgctcatactgct
gaagttaactgtctctcattcaatccttacagtgaatttatattagcttcaggctcagca
gataagactgttgccttatgggatttacgtaatttaaaactcaaactgcactcctttgaa
tctcataaagatgaaatattccaggtacaatggtcaccccataatgaaactattctagca
tccagtggtactgacagacgattacatgtatgggatttaagtaaaattggtgaagaacaa
tctgctgaagatgctgaagatggacctccagaactactatttatacatggtggacataca
gctaaaatatcagatttctcatggaatcctaatgaaccctgggtaatatgttcagtatcc
gaagacaatatcatgcaagtctggcaaatggctgagaatatctataatgatgaggaacca
gatacacctgctagtgatctagaacaaacagcttcctaa
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