KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_205756
Entry
LOTGIDRAFT_205756 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03082  ATP-dependent chromatin remodeling
lgi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    LOTGIDRAFT_205756
   03083 Polycomb repressive complex
    LOTGIDRAFT_205756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_205756
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     LOTGIDRAFT_205756
  Histone modification proteins
   HAT complexes
    HATB complex
     LOTGIDRAFT_205756
   HDAC complexes
    Sin3A-HDAC complex
     LOTGIDRAFT_205756
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     LOTGIDRAFT_205756
    PRC2.2
     LOTGIDRAFT_205756
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     LOTGIDRAFT_205756
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    LOTGIDRAFT_205756
  Chromatin remodeling factors
   NuRD complex
    LOTGIDRAFT_205756
   NuRF complex
    LOTGIDRAFT_205756
   NuRF complex (fruit fly)
    LOTGIDRAFT_205756
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_RIG_1st eIF2A Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 20245863
NCBI-ProteinID: XP_009060217
JGI: 205756
UniProt: V4BKR5
LinkDB
Position
Unknown
AA seq 432 aa
MTEKEEGAVISEGYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVS
RPSDKDYSLHRLILGTHTSDEQNHLLIASVQLPNDNVQFDASHYDSEKGEFGGFGSVSGK
IEIEIKINHEGEVNRARSMPQNPFIIATKTPSCDVLLFDYSKHPSKPDPSGECHPELRLK
GHQKEGYGLSWNPNLNGHLLSASDDHTICLWDVNAGTKDSKTVDAHTIFTGHTSVVEDVA
WHLLHESLFGSVADDQKLMIWDTRSNNPNKPSHTVDAHTAEVNCLSFNPYSEFILASGSA
DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ
SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEP
DTPASDLEQTAS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgacggaaaaggaagaaggagcagtgatatcagaagggtatgatgatgctgtcgaagaa
cgagttataaatgaagaatacaaaatatggaagaaaaacaccccttttctttatgatttg
gtcatgacgcatgccttagaatggccaagtttgacagctcagtggttacctgatgtttca
agaccaagtgataaagattattccctacacagactgattttaggcacacacacatctgat
gaacagaatcatttattgatagctagcgtacaattacctaatgataatgttcaatttgat
gcttcacattatgacagtgaaaagggagaatttggtggatttggatctgttagtggtaaa
attgaaatagagataaaaataaaccatgaaggtgaagtgaatagagccagatccatgcca
cagaatccatttatcattgctacaaaaacaccatcttgtgatgtcctgttatttgactac
tcaaaacacccttcaaaaccagatcctagtggtgagtgtcaccctgaattaagattgaaa
ggacatcagaaagaaggttatggtctgtcatggaatcctaatttaaatggacatttatta
agtgcttcagatgatcatacaatatgtttatgggacgtgaatgctggaactaaagatagt
aaaacagttgatgctcatacaatatttactggtcatacatcagttgtagaggatgttgca
tggcatttattacatgaaagtttatttggttctgttgctgatgatcagaaattaatgatt
tgggatacaagatcaaacaaccctaataaacccagtcatacagtagatgctcatactgct
gaagttaactgtctctcattcaatccttacagtgaatttatattagcttcaggctcagca
gataagactgttgccttatgggatttacgtaatttaaaactcaaactgcactcctttgaa
tctcataaagatgaaatattccaggtacaatggtcaccccataatgaaactattctagca
tccagtggtactgacagacgattacatgtatgggatttaagtaaaattggtgaagaacaa
tctgctgaagatgctgaagatggacctccagaactactatttatacatggtggacataca
gctaaaatatcagatttctcatggaatcctaatgaaccctgggtaatatgttcagtatcc
gaagacaatatcatgcaagtctggcaaatggctgagaatatctataatgatgaggaacca
gatacacctgctagtgatctagaacaaacagcttcctaa

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