Lottia gigantea (owl limpet): LOTGIDRAFT_206542
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Entry
LOTGIDRAFT_206542 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_206542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_206542
Membrane trafficking [BR:
lgi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
LOTGIDRAFT_206542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF7809
Motif
Other DBs
NCBI-GeneID:
20245922
NCBI-ProteinID:
XP_009056342
JGI:
206542
UniProt:
V3ZP24
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPATPQLSPQEEQEKLLEEAIGVVKNQAFQMKRCLDKGKLMDGLKHASTMLGELRTSLLS
PKSYYELYMAISDELRHLEMYLVEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGVVYI
KSNELSRRDILKDLVEMCRGVQHPLRGLFLRNYLLQCTKNVLPDNNDDATGGENESGNVQ
DSVDFIQLNFAEMNKLWVRMQHQGHSRDRERREQERRELRILVGTNLVRLSQLECIDMER
FKKNVLPGVLEQVVNCKDPISQEYLMECVIQVFPDDNHLQCLSAFLRACADLHPNVNVKN
IIIALIDRLASFAQSEEGNGIPSDIQLFDIFSQQIAQVIQNRPDMPPEDIVALQVALMNL
ALKCYPDKVEYVDKVLETTEDIFNRLNLDHLEHGAAVSKELMKLMKIPIDTYNSILTVLE
LQHFGAMFEYFDYKGRKLMSCFIINNILENETCIPTQEQVDLILNIVNCLVQDQNDQPEE
IDDPEDFAEEQGLMGRFIHLLYSEDPNQQFLILNMARKHFGSGGDQRIKFTLPPIVFAAC
RLANRYVDLKEEDENWEKKCQKIFQFVHQTIGALIKAELAEIPLRLFLQGAVTAGGIEFE
NHETVAYEFMSQAFSIYEEEISDSKAQLAAITLIIATLEQMSCFGEENHEPLRTQCALAA
SKLLKKPDQCRGVSICSHLFWSGKNSKGEEMRDGKRVSDCLKKGLKIANQCMDSSVQVQL
FVELLNHYIYFFEKGCDQISIQVLNQIITKIQEHLPNLEANEETDQINKHFKNTVEHLQM
KKEIGDTEVSFAGLTI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgacaccgcaactgtctcctcaagaggagcaagaaaaactcttagaagaagca
atcggtgttgttaaaaatcaagctttccagatgaaaagatgtcttgataagggaaaattg
atggatggattgaaacatgcatctacaatgttgggagagctaagaacctcactactgtca
ccaaaaagctattatgagctgtacatggcaatctctgatgaactacgacatcttgaaatg
tacctggtggaagaattccagaaaggacgaaaagttgctgatctctatgaattggttcaa
tatgcaggaaatattgttcctagattatacctcctgatcacagttggagttgtgtacatc
aaatcaaatgaactatctagaagagacatcctgaaggatcttgtagaaatgtgtcgaggt
gtgcaacatcctttgagaggtctgtttcttagaaattatcttctccagtgtactaagaat
gttttaccagataataatgatgatgctactggtggagaaaatgagagtggaaatgtccaa
gattctgtggatttcatacagttgaattttgctgaaatgaataaattgtgggttcgaatg
cagcatcaaggtcactccagagatcgagaaagacgagaacaggaaagaagagaattaaga
atattggtaggaactaatttggtacgattgagtcaactggaatgtattgatatggagaga
tttaagaagaatgtcttacctggtgttttagagcaggtggtcaactgtaaagatcccatt
tcacaagaatatttaatggaatgtgtcattcaagtctttcctgatgacaaccatttgcaa
tgtctgagtgcgttcctgagagcatgtgctgatctgcatccaaatgtcaacgtgaaaaac
atcatcatagctttgattgatcgattagcatcatttgctcagagtgaagaaggcaatgga
attccatcagatattcaactttttgatattttctcacagcagatagcacaagttatccaa
aacagacctgatatgccaccggaagacattgtggccctgcaagtagctttgatgaatctg
gcattgaaatgctatcctgataaagtagaatatgttgataaagtgttagaaactactgaa
gatatatttaacaggttaaatctggaccaccttgaacatggtgcagctgtttctaaagaa
ttgatgaaattgatgaaaatcccaattgacacttacaatagcatcctgactgttttggaa
cttcaacattttggagccatgtttgaatatttcgactataaagggaggaaactcatgagt
tgtttcatcattaacaatattctggaaaatgaaacgtgtattcctactcaagagcaagtt
gacttgatactaaatattgtgaattgcttggttcaagatcagaatgatcagcctgaagag
attgatgatcctgaagattttgctgaagaacaaggtcttatgggaaggtttattcatctg
ctctactccgaagatcctaatcaacagttcctgattcttaatatggccaggaaacatttt
ggaagtggaggtgaccaaagaatcaagtttaccttacccccaattgtttttgccgcttgc
cgtctggccaacagatatgtggacttgaaagaagaagatgaaaattgggaaaaaaaatgt
caaaagattttccaatttgttcaccaaactattggtgctctaattaaagcagaattagct
gaaattcctctacgtctgttcctacaaggggcagtaactgctggtggaattgagtttgaa
aaccatgaaactgtggcttatgaatttatgtcacaggctttctctatttatgaagaggaa
atcagtgatagtaaagctcaattggcagccattacattgatcattgctactttggaacaa
atgtcgtgttttggagaagaaaaccatgaacctctcagaacgcagtgtgcccttgctgct
tctaaattgttgaagaaacctgatcaatgtcgtggagtgtcaatctgttcccatttattt
tggtctggtaaaaatagtaaaggtgaagaaatgagagatggtaaacgtgtgtcagattgt
ttaaagaaaggacttaaaatcgctaaccaatgtatggacagttctgttcaagttcaactc
tttgtggagttattgaatcattacatttatttctttgaaaaaggttgtgatcaaatatct
atccaagttctaaaccaaataatcaccaaaattcaagaacatttaccaaatttggaggca
aatgaggaaaccgatcaaatcaacaaacatttcaagaacactgttgaacatttacaaatg
aagaaagaaattggtgatactgaagtttcatttgcaggactcaccatttaa
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