Lottia gigantea (owl limpet): LOTGIDRAFT_207505
Help
Entry
LOTGIDRAFT_207505 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14004
protein transport protein SEC13
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi04141
Protein processing in endoplasmic reticulum
lgi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_207505
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_207505
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
LOTGIDRAFT_207505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_207505
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_207505
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LOTGIDRAFT_207505
Membrane trafficking [BR:
lgi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
LOTGIDRAFT_207505
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
LOTGIDRAFT_207505
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
LOTGIDRAFT_207505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
20245998
NCBI-ProteinID:
XP_009044725
JGI:
207505
UniProt:
V4BAM6
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MVSVLNTVDTAHEDMVHDAQLDYYGTKLATCSSDRSVKVFDVRNGQQTLISDLAGHEGPV
WQLAWAHPMFGNTLASCGYDRKVIIWKENNGTWGKIYEYTNHDSSVNSVAFAPHEFGLLL
ACGSSDGTISIISSTGDGTWDSKKINNAHSIGCNAVSWAPAVTPNSLFDTGIRQQPVKRI
VSGGCDNLVKIWREEEGQWIEEQKLDGHSDWVRDVAWAPSIGLPKSIIATCSQDCRVIIW
TNDGSNTTWVSKVLQKFNDVVWHVSWSITGNILAVSGGDNKVSLWKESTEGQWVCISDVN
KGQGQISEDKDRENQQN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgttttaaatacagttgacactgctcacgaagatatggtgcatgatgctcag
ctagattattatggaaccaaattagctacatgttcatcagatagatctgtaaaagtattt
gatgttagaaatggacaacagactttgatatcagatctagcagggcatgaaggtccagta
tggcagctagcatgggcacatcctatgtttggtaataccttagcctcatgtggttatgat
agaaaagttataatatggaaagaaaataatggtacatggggcaagatatatgaatacaca
aatcatgactcatcagttaattctgtagcttttgcaccacatgaatttgggttattatta
gcttgtggaagttctgatggtactatatccataatatccagtacaggagatggaacatgg
gattctaagaaaataaataatgctcattctataggatgtaatgctgttagttgggcacca
gctgttacaccaaattcattatttgatactggaatcagacaacaacctgttaaacgtatt
gtatctggtggatgtgataacctagtcaaaatatggagagaagaagaaggtcagtggata
gaagaacagaaattagatggacatagtgattgggttagagatgtagcctgggcaccctct
ataggactacctaaaagtataatagcaacatgttctcaggattgtagagttataatatgg
accaatgatggtagcaatactacctgggtatctaaagttttacagaaatttaatgatgtt
gtgtggcatgttagttggagtataactggaaatattttagctgtatcagggggagataat
aaagtaagtttatggaaagaatcaactgaaggacagtgggtgtgtattagtgatgtgaat
aaagggcaaggacaaatttcagaagataaagatcgagaaaatcaacagaattga
DBGET
integrated database retrieval system