KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_207505
Entry
LOTGIDRAFT_207505 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
lgi04141  Protein processing in endoplasmic reticulum
lgi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_207505
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    LOTGIDRAFT_207505
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    LOTGIDRAFT_207505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_207505
   04131 Membrane trafficking [BR:lgi04131]
    LOTGIDRAFT_207505
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     LOTGIDRAFT_207505
Membrane trafficking [BR:lgi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    LOTGIDRAFT_207505
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    LOTGIDRAFT_207505
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    LOTGIDRAFT_207505
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st
Other DBs
NCBI-GeneID: 20245998
NCBI-ProteinID: XP_009044725
JGI: 207505
UniProt: V4BAM6
LinkDB
Position
Unknown
AA seq 317 aa
MVSVLNTVDTAHEDMVHDAQLDYYGTKLATCSSDRSVKVFDVRNGQQTLISDLAGHEGPV
WQLAWAHPMFGNTLASCGYDRKVIIWKENNGTWGKIYEYTNHDSSVNSVAFAPHEFGLLL
ACGSSDGTISIISSTGDGTWDSKKINNAHSIGCNAVSWAPAVTPNSLFDTGIRQQPVKRI
VSGGCDNLVKIWREEEGQWIEEQKLDGHSDWVRDVAWAPSIGLPKSIIATCSQDCRVIIW
TNDGSNTTWVSKVLQKFNDVVWHVSWSITGNILAVSGGDNKVSLWKESTEGQWVCISDVN
KGQGQISEDKDRENQQN
NT seq 954 nt   +upstreamnt  +downstreamnt
atggtatctgttttaaatacagttgacactgctcacgaagatatggtgcatgatgctcag
ctagattattatggaaccaaattagctacatgttcatcagatagatctgtaaaagtattt
gatgttagaaatggacaacagactttgatatcagatctagcagggcatgaaggtccagta
tggcagctagcatgggcacatcctatgtttggtaataccttagcctcatgtggttatgat
agaaaagttataatatggaaagaaaataatggtacatggggcaagatatatgaatacaca
aatcatgactcatcagttaattctgtagcttttgcaccacatgaatttgggttattatta
gcttgtggaagttctgatggtactatatccataatatccagtacaggagatggaacatgg
gattctaagaaaataaataatgctcattctataggatgtaatgctgttagttgggcacca
gctgttacaccaaattcattatttgatactggaatcagacaacaacctgttaaacgtatt
gtatctggtggatgtgataacctagtcaaaatatggagagaagaagaaggtcagtggata
gaagaacagaaattagatggacatagtgattgggttagagatgtagcctgggcaccctct
ataggactacctaaaagtataatagcaacatgttctcaggattgtagagttataatatgg
accaatgatggtagcaatactacctgggtatctaaagttttacagaaatttaatgatgtt
gtgtggcatgttagttggagtataactggaaatattttagctgtatcagggggagataat
aaagtaagtttatggaaagaatcaactgaaggacagtgggtgtgtattagtgatgtgaat
aaagggcaaggacaaatttcagaagataaagatcgagaaaatcaacagaattga

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