KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_208106
Entry
LOTGIDRAFT_208106 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03022  Basal transcription factors
lgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LOTGIDRAFT_208106
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOTGIDRAFT_208106
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lgi01001]
    LOTGIDRAFT_208106
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_208106
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_208106
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_208106
Enzymes [BR:lgi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     LOTGIDRAFT_208106
    2.7.11.23  [RNA-polymerase]-subunit kinase
     LOTGIDRAFT_208106
Protein kinases [BR:lgi01001]
 Serine/threonine kinases: CMGC group
  CDK family
   LOTGIDRAFT_208106
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LOTGIDRAFT_208106
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     LOTGIDRAFT_208106
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LOTGIDRAFT_208106
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like
Other DBs
NCBI-GeneID: 20246046
NCBI-ProteinID: XP_009043710
JGI: 208106
UniProt: V4CRM0
LinkDB
Position
Unknown
AA seq 338 aa
MTEDRVKRYEKIDFLGEGQFATVYKARDTKTDQIVAVKKIKIGTRAEAADGINRTALREI
KLLQEIEHPNIIGLLDVFGQKSNISLVFDFMETDLEIIIKDNNIVLTPPHIKSYILQTLL
GLEYLHSHWILHRDMKPNNLLMNDQGVLKIGDFGLAKFYGSPSRPYSHQVVTRWYRCPEL
LYGARFYSTGVDIWAVGCILAELLIRVPFFPGDSDLDQLSRIFQVTGTPSLEDWPDMKAL
PDYIQFKEYPKQQYKDIFIAASDDLLDLLEATLALDPLKRCTATEAVQMPYFSNKPAPSR
GAQLPRPGSNKIIPKEQELKRAGIKRKQAADQGNIICY
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaccgaagatcgagtgaaaagatatgaaaaaatcgactttttgggagaggggcagttt
gccactgtttataaagccagagatactaaaacagatcaaatagttgctgttaaaaaaatt
aagatagggacgagagctgaagcagctgatggaattaatagaacagctttacgagaaatc
aaattattacaagaaatagaacatccaaatattattggattactagatgtgtttggtcag
aagtctaatatcagtttagtttttgattttatggaaacagatcttgaaattattataaaa
gataacaatatagttttaactccacctcatatcaaatcatatatattacaaacattgtta
ggattagagtatttacattcacattggatattacatagggatatgaaaccaaataattta
ttaatgaatgatcaaggtgtcttaaagattggagattttggtttagctaagttttatggt
tctcccagtcgaccctattcacatcaagttgtcactcgatggtatagatgtccagaatta
ttatatggtgctagattctatagtactggtgttgatatttgggctgtaggctgtatcttg
gctgaattacttatcagggtaccattttttccgggagattctgatttagatcagttgagt
agaatttttcaagttactggtaccccatctctcgaagactggccggatatgaaggcatta
ccagactatatccagtttaaagaatatcccaaacaacaatataaagatatatttatagca
gctagtgatgatttgttagatctattagaagccactttagcattagatcctttaaaacgc
tgtactgcaacagaggctgtacagatgccatattttagtaacaaaccagctccttctcgt
ggagctcaattacctcgacctggatctaataagattatacctaaagaacaagaattaaaa
agagctggtattaaacgtaaacaagctgctgatcaaggtaatataatatgttattga

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