Lottia gigantea (owl limpet): LOTGIDRAFT_208106
Help
Entry
LOTGIDRAFT_208106 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03022
Basal transcription factors
lgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOTGIDRAFT_208106
09124 Replication and repair
03420 Nucleotide excision repair
LOTGIDRAFT_208106
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lgi01001
]
LOTGIDRAFT_208106
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_208106
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_208106
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_208106
Enzymes [BR:
lgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
LOTGIDRAFT_208106
2.7.11.23 [RNA-polymerase]-subunit kinase
LOTGIDRAFT_208106
Protein kinases [BR:
lgi01001
]
Serine/threonine kinases: CMGC group
CDK family
LOTGIDRAFT_208106
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LOTGIDRAFT_208106
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
LOTGIDRAFT_208106
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LOTGIDRAFT_208106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
20246046
NCBI-ProteinID:
XP_009043710
JGI:
208106
UniProt:
V4CRM0
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MTEDRVKRYEKIDFLGEGQFATVYKARDTKTDQIVAVKKIKIGTRAEAADGINRTALREI
KLLQEIEHPNIIGLLDVFGQKSNISLVFDFMETDLEIIIKDNNIVLTPPHIKSYILQTLL
GLEYLHSHWILHRDMKPNNLLMNDQGVLKIGDFGLAKFYGSPSRPYSHQVVTRWYRCPEL
LYGARFYSTGVDIWAVGCILAELLIRVPFFPGDSDLDQLSRIFQVTGTPSLEDWPDMKAL
PDYIQFKEYPKQQYKDIFIAASDDLLDLLEATLALDPLKRCTATEAVQMPYFSNKPAPSR
GAQLPRPGSNKIIPKEQELKRAGIKRKQAADQGNIICY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagatcgagtgaaaagatatgaaaaaatcgactttttgggagaggggcagttt
gccactgtttataaagccagagatactaaaacagatcaaatagttgctgttaaaaaaatt
aagatagggacgagagctgaagcagctgatggaattaatagaacagctttacgagaaatc
aaattattacaagaaatagaacatccaaatattattggattactagatgtgtttggtcag
aagtctaatatcagtttagtttttgattttatggaaacagatcttgaaattattataaaa
gataacaatatagttttaactccacctcatatcaaatcatatatattacaaacattgtta
ggattagagtatttacattcacattggatattacatagggatatgaaaccaaataattta
ttaatgaatgatcaaggtgtcttaaagattggagattttggtttagctaagttttatggt
tctcccagtcgaccctattcacatcaagttgtcactcgatggtatagatgtccagaatta
ttatatggtgctagattctatagtactggtgttgatatttgggctgtaggctgtatcttg
gctgaattacttatcagggtaccattttttccgggagattctgatttagatcagttgagt
agaatttttcaagttactggtaccccatctctcgaagactggccggatatgaaggcatta
ccagactatatccagtttaaagaatatcccaaacaacaatataaagatatatttatagca
gctagtgatgatttgttagatctattagaagccactttagcattagatcctttaaaacgc
tgtactgcaacagaggctgtacagatgccatattttagtaacaaaccagctccttctcgt
ggagctcaattacctcgacctggatctaataagattatacctaaagaacaagaattaaaa
agagctggtattaaacgtaaacaagctgctgatcaaggtaatataatatgttattga
DBGET
integrated database retrieval system