Lottia gigantea (owl limpet): LOTGIDRAFT_208267
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Entry
LOTGIDRAFT_208267 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_208267
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_208267
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgi03037
]
LOTGIDRAFT_208267
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_208267
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
LOTGIDRAFT_208267
UBL E3 ligases
LOTGIDRAFT_208267
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
LOTGIDRAFT_208267
Cilium and associated proteins [BR:
lgi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
LOTGIDRAFT_208267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-Di19
PWI
Prok-RING_4
zf-RING_10
Rad50_zn_hook
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
20246050
NCBI-ProteinID:
XP_009043802
JGI:
208267
UniProt:
V4BH35
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MADSSSIETRSKKKKGSSNSKKKTEEVVKPTSPPADTGQDEAKTDTHARSSGSPDPNCSI
CLGKLENKSFTDSCFHMFCFVCLLEWSKVKNECPLCKQSFKSIIHNVRSYEDYDQYHLII
SRPRSPEHPYSRNFRYRTTLTEDRVFNLRNRVIGNPVTDPETVLQLQAIGAPTNYPVQAY
EMARQNWNRRRQASTSDFRRRIYTNGMRLTGIRGANNRVRECSPAFFTRNPALTHRLVPW
LNRELNALLHDEELHVQFLLELIMGLVKRFDIGSEDFYQHVSPFIGRHTRQFMREFESFA
KCPYCMVVYDKKAMYEHVAESVSSDSSTINSVSDDDSDVQFISSEAAPANERTSEYINLP
DISSEIQVTSTVDSPRNQNFLQNAGWMSPTPGPSWGFEPIMPPSRQKSFIPSLKRSVGAS
DTEVDSSADSLSSAGSDVQVVAYDKPWEERSPINLSSETEIERPVKEKKLK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcaagttcaatagagactagatcaaaaaagaagaaaggttcgtccaactca
aagaaaaaaaccgaagaagtagtcaaaccaacatcacctcctgcagatactggacaagat
gaagccaagactgacacacatgcaagatcttctggctcaccagatccaaactgttccatc
tgccttggcaaactggaaaacaaatcctttacagatagctgttttcatatgttttgtttt
gtctgcctgcttgaatggtcgaaggttaagaatgaatgtcccctatgtaaacaatctttt
aaaagcatcatacataatgtccgttcctatgaagactatgaccaatatcatttgatcatt
agtagaccacgttcccctgaacatccatacagtcgcaatttccggtatagaacaactttg
actgaagatagagttttcaatctacgaaatagagtcattggaaatccagttacagatcca
gagacagtcctacaactccaagcaattggtgcaccaaccaattacccagtacaagcctat
gaaatggcaagacaaaattggaatcgtagacgacaagcctcaacttctgattttagacgt
agaatttatacaaacggaatgcgtttgactggtattcgtggtgccaacaatagagttaga
gagtgttcacccgctttttttacaaggaacccagctctcactcaccgattagttccttgg
ttgaatcgtgaactgaatgctttattacacgatgaagaattacacgttcagtttcttctt
gaactaataatgggtcttgttaaacgatttgacattggtagtgaggacttttaccaacat
gtctctccttttattggtcgtcacacccggcaattcatgcgagagtttgagtcattcgcc
aagtgtccttattgcatggttgtatatgataaaaaggctatgtatgaacatgttgcagag
tctgtgtcttccgattcctccacaatcaactctgttagtgatgatgatagtgatgttcaa
tttatatcatccgaggctgcaccagccaatgaaagaaccagtgaatatattaaccttcca
gacataagctcagaaatccaggtcaccagtacagttgacagtccaagaaatcaaaacttt
ttacagaatgcaggatggatgtccccaacaccaggaccttcttggggctttgaaccaatc
atgcctccatcgagacagaagagtttcattccaagcttgaaacgttctgttggtgcttct
gatactgaagttgattccagtgcagattcattaagttctgcaggcagcgatgtgcaggtg
gttgcttatgacaagccttgggaggaacggtcaccaatcaatctgtcttctgaaacagag
attgagagacctgtgaaagaaaagaaactaaaa
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