KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_208727
Entry
LOTGIDRAFT_208727 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03030  DNA replication
lgi03420  Nucleotide excision repair
lgi03430  Mismatch repair
lgi03440  Homologous recombination
lgi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOTGIDRAFT_208727
   03420 Nucleotide excision repair
    LOTGIDRAFT_208727
   03430 Mismatch repair
    LOTGIDRAFT_208727
   03440 Homologous recombination
    LOTGIDRAFT_208727
   03460 Fanconi anemia pathway
    LOTGIDRAFT_208727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lgi03000]
    LOTGIDRAFT_208727
   03032 DNA replication proteins [BR:lgi03032]
    LOTGIDRAFT_208727
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_208727
Transcription factors [BR:lgi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    LOTGIDRAFT_208727
DNA replication proteins [BR:lgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    LOTGIDRAFT_208727
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     LOTGIDRAFT_208727
   MMR (mismatch excision repair)
     LOTGIDRAFT_208727
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     LOTGIDRAFT_208727
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 OB_MEIOB_N
Other DBs
NCBI-GeneID: 20246083
NCBI-ProteinID: XP_009051407
JGI: 208727
UniProt: V4AKB4
LinkDB
Position
Unknown
AA seq 613 aa
MAPNLSGGAIEAIINGESPEKPILQVVSFKKLGSGNAERYRIMLSDGDLIYSHAMLATQL
NELMENGKVDNNCVIQVERYLCNTVQNGRRVMIVLDVNVLAPGSSIGQKIGNPQVYKPGN
EGGQQVNGNDNKPDVKPAAPINQSMNKPQSNYMNGSMTNNNKPGYSIKGGGNANTASPSS
TRVHAIASLTPYQNRWRIRARVTQKSAVKTWSNSRGEGKLFSINLLDESGEIRATGFNDA
VDKFYDMLEVNKVYYVSRATLKTANKQYSNVNNDYEMTFNPDTNIEVCTEDTDLPTMTFD
FVSISELDKHQPNSMIDIIGVVNKCGEVGTVVGRQSQKEITKRDLTIVDQSGVSVNVTLW
GSDAAQFNGDGNPVVAVKGARLSDYGGRSLSVLASSQMILNPDTRESHFLRGWYDREGQS
MNFDRFTSDNASGGGGGTNWKNFSQVKSENLGQSGKADFFTTKATIVYMKKENCMYQACP
TDQCNKKVVDQGNGLYRCEKCSKEFPNYKWRMILSANLADFCDNQWITMFQESAESVLGE
KADIIGNMREQNENQFDMLFQNALFKSYVFKLRAKVETYNDENRLKTVCMSATPMDWVEY
GNHLVQDINKLTS
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggcaccaaatctgtctggtggtgccatagaggccattattaatggagagtctccagaa
aaaccaattcttcaagttgttagttttaaaaagttaggtagtggaaatgctgaaagatat
agaatcatgttatcagatggagacctaatttactctcatgctatgttagccacacagtta
aatgaattaatggagaatggtaaagttgataataattgtgttatacaagttgaaagatat
ctttgtaacactgtgcaaaatggaaggagagtcatgatagttctagatgtaaatgttcta
gcaccaggttcaagtattggacagaagataggaaatccgcaagtttataaacctggaaat
gaaggtggacaacaagttaatggtaatgataataaacctgacgtcaaaccagctgccccc
atcaatcagagtatgaataaaccacagagtaattacatgaacggttctatgactaataac
aataaacctggttatagtatcaaaggtggtggaaatgctaacacagctagtccttcatct
accagagtacatgctatagccagtctgacaccatatcaaaatagatggcgtattcgagcg
agagtaacacagaaatcagcagttaaaacatggagtaattcaagaggggaaggaaagtta
ttcagtatcaatctattagatgaatcaggggagataagagctacaggttttaatgatgcc
gtagataagttctatgatatgcttgaagtcaataaggtatattatgtcagtcgagccaca
ttaaaaacagctaataaacaatattctaacgtgaacaatgattatgagatgacctttaac
cctgatactaatattgaagtctgtacagaagatactgatttaccaaccatgacttttgat
tttgtatcaatatcagaactagataaacatcaacctaacagtatgatagatattattgga
gtagttaacaaatgtggagaagttggtacagttgttggtagacagagtcagaaagaaata
accaagcgtgatttaacaatagtggatcaatctggtgtcagtgtaaacgttacattatgg
ggaagtgatgcagctcagtttaatggtgatggaaatccagttgttgcagtgaaaggtgcc
agattgtctgattatggtggacgttcattatctgtacttgccagtagtcagatgatatta
aatcctgatacaagagagagtcatttcttacgaggatggtatgatagagagggacagagt
atgaactttgatagatttaccagtgataatgcatcaggtggaggtggtggaacaaactgg
aagaatttctctcaagtgaaaagtgagaacttgggtcaatcgggaaaagctgatttcttt
acaactaaagctacaattgtttatatgaaaaaagaaaattgcatgtatcaggcatgtcct
acagatcagtgtaataaaaaggtggtagaccaaggtaatggtttatacagatgtgaaaaa
tgtagcaaagaattccctaattataaatggagaatgattttaagtgcaaacttggctgat
ttttgtgataatcagtggattacaatgtttcaagaatcagcagaatctgtattgggagaa
aaggctgatattattggtaatatgagagaacagaatgaaaaccagtttgacatgttgttt
caaaatgcattatttaaatcttatgtatttaaactgagggctaaagtggaaacatacaat
gatgaaaatcgattgaaaacagtatgtatgtcagctacaccaatggactgggttgaatat
ggaaatcatttggttcaagatataaataaacttacttcctaa

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