Lottia gigantea (owl limpet): LOTGIDRAFT_208727
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Entry
LOTGIDRAFT_208727 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03030
DNA replication
lgi03420
Nucleotide excision repair
lgi03430
Mismatch repair
lgi03440
Homologous recombination
lgi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOTGIDRAFT_208727
03420 Nucleotide excision repair
LOTGIDRAFT_208727
03430 Mismatch repair
LOTGIDRAFT_208727
03440 Homologous recombination
LOTGIDRAFT_208727
03460 Fanconi anemia pathway
LOTGIDRAFT_208727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgi03000
]
LOTGIDRAFT_208727
03032 DNA replication proteins [BR:
lgi03032
]
LOTGIDRAFT_208727
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_208727
Transcription factors [BR:
lgi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LOTGIDRAFT_208727
DNA replication proteins [BR:
lgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LOTGIDRAFT_208727
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LOTGIDRAFT_208727
MMR (mismatch excision repair)
LOTGIDRAFT_208727
DSBR (double strand breaks repair)
HR (homologous recombination)
LOTGIDRAFT_208727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
20246083
NCBI-ProteinID:
XP_009051407
JGI:
208727
UniProt:
V4AKB4
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAPNLSGGAIEAIINGESPEKPILQVVSFKKLGSGNAERYRIMLSDGDLIYSHAMLATQL
NELMENGKVDNNCVIQVERYLCNTVQNGRRVMIVLDVNVLAPGSSIGQKIGNPQVYKPGN
EGGQQVNGNDNKPDVKPAAPINQSMNKPQSNYMNGSMTNNNKPGYSIKGGGNANTASPSS
TRVHAIASLTPYQNRWRIRARVTQKSAVKTWSNSRGEGKLFSINLLDESGEIRATGFNDA
VDKFYDMLEVNKVYYVSRATLKTANKQYSNVNNDYEMTFNPDTNIEVCTEDTDLPTMTFD
FVSISELDKHQPNSMIDIIGVVNKCGEVGTVVGRQSQKEITKRDLTIVDQSGVSVNVTLW
GSDAAQFNGDGNPVVAVKGARLSDYGGRSLSVLASSQMILNPDTRESHFLRGWYDREGQS
MNFDRFTSDNASGGGGGTNWKNFSQVKSENLGQSGKADFFTTKATIVYMKKENCMYQACP
TDQCNKKVVDQGNGLYRCEKCSKEFPNYKWRMILSANLADFCDNQWITMFQESAESVLGE
KADIIGNMREQNENQFDMLFQNALFKSYVFKLRAKVETYNDENRLKTVCMSATPMDWVEY
GNHLVQDINKLTS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaatctgtctggtggtgccatagaggccattattaatggagagtctccagaa
aaaccaattcttcaagttgttagttttaaaaagttaggtagtggaaatgctgaaagatat
agaatcatgttatcagatggagacctaatttactctcatgctatgttagccacacagtta
aatgaattaatggagaatggtaaagttgataataattgtgttatacaagttgaaagatat
ctttgtaacactgtgcaaaatggaaggagagtcatgatagttctagatgtaaatgttcta
gcaccaggttcaagtattggacagaagataggaaatccgcaagtttataaacctggaaat
gaaggtggacaacaagttaatggtaatgataataaacctgacgtcaaaccagctgccccc
atcaatcagagtatgaataaaccacagagtaattacatgaacggttctatgactaataac
aataaacctggttatagtatcaaaggtggtggaaatgctaacacagctagtccttcatct
accagagtacatgctatagccagtctgacaccatatcaaaatagatggcgtattcgagcg
agagtaacacagaaatcagcagttaaaacatggagtaattcaagaggggaaggaaagtta
ttcagtatcaatctattagatgaatcaggggagataagagctacaggttttaatgatgcc
gtagataagttctatgatatgcttgaagtcaataaggtatattatgtcagtcgagccaca
ttaaaaacagctaataaacaatattctaacgtgaacaatgattatgagatgacctttaac
cctgatactaatattgaagtctgtacagaagatactgatttaccaaccatgacttttgat
tttgtatcaatatcagaactagataaacatcaacctaacagtatgatagatattattgga
gtagttaacaaatgtggagaagttggtacagttgttggtagacagagtcagaaagaaata
accaagcgtgatttaacaatagtggatcaatctggtgtcagtgtaaacgttacattatgg
ggaagtgatgcagctcagtttaatggtgatggaaatccagttgttgcagtgaaaggtgcc
agattgtctgattatggtggacgttcattatctgtacttgccagtagtcagatgatatta
aatcctgatacaagagagagtcatttcttacgaggatggtatgatagagagggacagagt
atgaactttgatagatttaccagtgataatgcatcaggtggaggtggtggaacaaactgg
aagaatttctctcaagtgaaaagtgagaacttgggtcaatcgggaaaagctgatttcttt
acaactaaagctacaattgtttatatgaaaaaagaaaattgcatgtatcaggcatgtcct
acagatcagtgtaataaaaaggtggtagaccaaggtaatggtttatacagatgtgaaaaa
tgtagcaaagaattccctaattataaatggagaatgattttaagtgcaaacttggctgat
ttttgtgataatcagtggattacaatgtttcaagaatcagcagaatctgtattgggagaa
aaggctgatattattggtaatatgagagaacagaatgaaaaccagtttgacatgttgttt
caaaatgcattatttaaatcttatgtatttaaactgagggctaaagtggaaacatacaat
gatgaaaatcgattgaaaacagtatgtatgtcagctacaccaatggactgggttgaatat
ggaaatcatttggttcaagatataaataaacttacttcctaa
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integrated database retrieval system