Lottia gigantea (owl limpet): LOTGIDRAFT_209056
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Entry
LOTGIDRAFT_209056 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
lgi04141
Protein processing in endoplasmic reticulum
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_209056
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_209056
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_209056
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_209056
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_209056
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_209056
03110 Chaperones and folding catalysts [BR:
lgi03110
]
LOTGIDRAFT_209056
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_209056
03051 Proteasome [BR:
lgi03051
]
LOTGIDRAFT_209056
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_209056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_209056
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
LOTGIDRAFT_209056
Spliceosome [BR:
lgi03041
]
Complex B
Other components
Prp19 complex
LOTGIDRAFT_209056
Complex C
Prp19-CDC5 complex
LOTGIDRAFT_209056
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
LOTGIDRAFT_209056
Chaperones and folding catalysts [BR:
lgi03110
]
Heat shock proteins
HSP70 / DNAK
LOTGIDRAFT_209056
Membrane trafficking [BR:
lgi04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
LOTGIDRAFT_209056
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
LOTGIDRAFT_209056
Proteasome [BR:
lgi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
LOTGIDRAFT_209056
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
LOTGIDRAFT_209056
Exosome [BR:
lgi04147
]
Exosomal proteins
Proteins found in most exosomes
LOTGIDRAFT_209056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
STIV_penton_2nd
ParM_N
RIN1
Membralin
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
20246114
NCBI-ProteinID:
XP_009051717
JGI:
209056
UniProt:
V4ALA1
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MTSKAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAL
NPENTIFDAKRLIGRKYTDDTVQKDMKHWPFTVINDGGKPKFQVDYKNEKKVFPPEEISS
MVLTKMKETAEAYLGQKVKDAVITVPAYFNDSQRLATKDAGTIAGLNVLRIINEPTAAAL
AYGLDKNLSGEKNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDQRMVEH
FIQEFKRKFKKDMSKNARAIRRLRSSCERAKRTLSSSAEASIEIDSLFEGTDFYTKISRA
RFEDLCSDLFRSTMDPVEKALKDAKMDKKQINEIVLVGGSTRIPKIQKLLQEFMNGRELN
KSINPDEAVAYGAAVQAAILSGDKSETIKDVLLVDVAPLSLGIETAGGVMTKLIERNSRI
PAKASNTFTTYSDNQPAVSIQVYEGERAMTKDNNLMGRFELMGIPPAPRGVPQIEVTFNI
DANGILNVSAEDKSTGKSNQITITNHRGRLSQAEIDRLVQEAEKFKDEDNKQKEKMSARN
QLESYIYSVKQTIDGVGEKLASEDKETAKKACDEGLNWLEGNALADKDEYEYKMQEIQKV
CSPIMTKMHQAGSGQPQAGGQPSARSGGSGPTVEEVD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaaagctattggcatcgatttgggaacaacttattcctgtgtcggagttttc
caacatggcaaagttgagatcattgccaacgaccaaggaaacagaacgacaccaagttat
gtggcgtttacagattctgagcgattgatcggagacgcagcgaagaaccaagtagcattg
aatccagaaaacaccatattcgatgcaaaacgtctgattggaagaaaatacaccgatgat
acggtccagaaggacatgaaacactggccgtttacagtgatcaatgatggcggcaaaccg
aaattccaagtggactacaaaaatgaaaagaaagtatttccaccggaagaaattagctcc
atggttttaacgaaaatgaaggagacagctgaagcgtatttaggtcagaaggtaaaggac
gcagtcatcacagtcccagcttatttcaacgattcacaaagattggccacaaaagacgct
gggactattgctggattaaacgttctgagaatcatcaatgaaccaacagccgctgccctg
gcttatggattggacaaaaatctttctggtgagaaaaacgttttgattttcgatttggga
ggaggaacctttgatgtctctatcctgacgattgacgaaggttccttgttcgaggtgaaa
tctactgctggagacacccatctcggaggagaagatttcgatcaaagaatggtggaacat
ttcattcaagaattcaagagaaagttcaagaaagacatgtctaaaaatgccagagctatt
agaagattaagaagtagctgtgaacgcgccaagagaactctatccagcagtgccgaagcc
agtattgagatcgactcgttatttgaaggaactgatttctacaccaaaatatccagagcc
agattcgaagacttgtgttcagatttgttcagaagtactatggatcctgtagaaaaagct
ctgaaagatgccaaaatggacaagaaacagatcaatgaaatcgttttagtcggaggatca
acaagaattccaaagatccagaaactgctgcaggagttcatgaatggtagagagctgaat
aaatccatcaacccggatgaagctgttgcttatggagcagctgttcaagccgctatcttg
agtggagacaagagtgaaaccatcaaagatgtactattggtagatgtagcaccattgtct
cttggtatagaaacagccggcggagttatgaccaaattaattgaacgtaacagcagaatc
cctgccaaagcgtcgaatacatttaccacctattccgacaaccagccagcagtttctatt
caagtatatgaaggtgagcgtgcgatgaccaaggacaataatctaatgggtcgatttgaa
ctgatgggaattccccctgcaccaagaggagttccccagattgaggtcaccttcaacatt
gatgctaatggtatattgaatgtatctgctgaagacaagagcactggtaaatccaatcaa
atcaccattaccaatcatagaggccgtctgagtcaggctgaaattgatcgtctggttcaa
gaagcagagaaattcaaagatgaggacaacaaacagaaagaaaagatgtctgctagaaac
cagctggaatcgtacatttatagtgttaaacagactatcgatggtgtaggtgaaaagttg
gcctctgaagacaaagaaacggcgaagaaagcctgtgacgaaggactaaattggttagag
ggaaatgctttggccgacaaggatgaatacgagtacaagatgcaagaaattcagaaggtc
tgttcacctattatgaccaaaatgcatcaagctggtagtggacaaccgcaagctggcgga
caaccatcagccagaagtggtggatctggaccgaccgtagaagaagttgattaa
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