Lottia gigantea (owl limpet): LOTGIDRAFT_212084
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Entry
LOTGIDRAFT_212084 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04136
Autophagy - other
lgi04140
Autophagy - animal
lgi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
LOTGIDRAFT_212084
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
LOTGIDRAFT_212084
04136 Autophagy - other
LOTGIDRAFT_212084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_212084
Membrane trafficking [BR:
lgi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
LOTGIDRAFT_212084
mTORC2 complex
LOTGIDRAFT_212084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
MIOS_WD40
WD40_RFWD3
Beta-prop_KIB1-4
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_LRRK2
Beta-prop_IFT122_1st
WD40_like
Nucleoporin_N
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
20246338
NCBI-ProteinID:
XP_009045395
JGI:
212084
UniProt:
V4B0Y3
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MSGIPEPVVLATAGYDHTIRFWQAHTGLCYRTVQHPDSQVNALEITPDKKRIAAAGYTHI
RIYDINSNNPNAIINYDGVPKNVVEVGFHDEGNWMFTGGEDCTARIWDLRARNLQCSRIF
QVHSPVTCVCLHPNQAELFVGDQGGSIHIWDLKTDKNERLVPEGTTAIQSITIDAMGTMM
AATNIKGNCFIWTLTGGKGDKPTELHPKSQFKAHEKYVLKCLFSPDSTLLATTSADGSCV
IWRTTDLTKFRILKEKTQRWVWDCAFSDDSVYIVTASSDNMARLWHIEEEKIEREYSGHQ
KAVVCLALRDENIP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcattcccgaaccagtggttttggcaacagcaggatatgatcacaccataaga
ttctggcaagcgcatacaggattatgctacaggacagttcaacatcccgactctcaagta
aatgcattagaaataacacctgataaaaaaagaatagcagctgcaggttatacccacatc
agaatctatgatataaactcgaacaaccccaacgctataatcaattatgatggtgtacct
aaaaacgtggtagaggttggatttcatgatgaaggtaattggatgtttactggtggtgag
gattgtacagctagaatctgggacttgagggcaagaaatttacaatgttcgaggatattt
caagttcacagtccagtcacatgtgtttgtttacatccaaatcaggctgaattatttgtt
ggagatcaaggtggttcaatacacatctgggatttaaaaactgataaaaatgaacgtttg
gtaccagaaggtactacagcaatacagtcaattactatagatgccatgggaaccatgatg
gctgccactaatattaaaggaaattgttttatttggactctaactggaggaaagggagat
aaaccaaccgaacttcatcccaaatctcagtttaaagcccatgaaaaatatgttttaaaa
tgtttattcagtccagattccactttattagctacaacgtcagctgatggaagctgtgtt
atatggaggacaacagatttaactaaattcaggatactgaaagagaaaacacagcggtgg
gtgtgggattgtgcttttagtgatgattcagtgtacattgtcacagcctcctcagacaat
atggcgaggttatggcatatagaggaagagaaaatagaaagagaatacagtggacatcag
aaggcggtggtctgtttagcattgagagatgaaaatattccctag
DBGET
integrated database retrieval system