Lottia gigantea (owl limpet): LOTGIDRAFT_213986
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Entry
LOTGIDRAFT_213986 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_213986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_213986
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_213986
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
LOTGIDRAFT_213986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
20246460
NCBI-ProteinID:
XP_009051054
JGI:
213986
UniProt:
V4A3F4
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDYIPDICRVCRCEGTPDKALYHPCVCTGSIKFIHQDCLLQWLTYSRKEYCELCKHRFAF
TPIYSPDMPKRLPIKDICSGLVTSMARAIRYWFHYTLVAFAWLGVVPLTACRIYRCLFTG
SVSSLLTLPLDMLSTENLASDCFQGCFVVTCTLCAFISLVWLREQILHGGGPDWLEQDNQ
QANQQRVNKFEYSLNSPANQNEGGNNPAANENEEEVEGEEVAEGNDGANHEANNDVNNDV
NNDNNGAQDDNNWNPIEWDRAAEELTWERLLGLDGSLVFLEHVFWVVSLNTLFILVFAFC
PYHIGHFTLVGCKVDDIVSASHFEGLLTTISGYVVIGIALVVLYLLCSLAKLKKFRRVLG
LCYVVVKVMLLVVVEVGVFPLICGWWLDICSLSMFDATLKDRKTSFHLAPGTSMFIHWLV
GMVYVFYFASFILLLREVLRPGVLWFLRNLNDPEFNPIQEMIHLPVYRHVRRFIASVIIF
GSTVLLMLWLPVRVIKKVFSTFLPYHVMLSSDAPVSELSLELLLLQVVLPALLEQGHTRL
WMKGMVRGWTVAVAWLLNLRSYLIGDEDVIHGDQPAPPQANNVHANNVAPPPAQPQGEGL
GAAHQAMLQGGGPTGFQPYKRPSIFAARVIMLVILMCVTLFAASLFSLTLPVFIGRRLMS
IWMGDVKIHELYTAACGLYVCWLSLRISLFLYNWIPQGYNVIIVKLKQWSLLALKSIIIA
VMLIGAVPLLLGLLFELVVVAPLRVPLDQSPVFFPWQDWALGVLHAKIICAVTMMGPQWW
LKQAMEQVYNDGLRNLNLLFILKHLCLPVVSSLGMALSVPYIIAKSFVPMFDVDEVTQTL
VERRIYPYLLSCIIIVSVCTFQLRQFRRLYNHIKDDKYLVGQRLVNYDPVSRKSQSQPQE
AVVS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggattatattccagatatctgtcgggtgtgccgatgtgagggcactccagacaaggct
ctgtatcatccatgtgtttgtactggaagtatcaaattcatccaccaagattgccttttg
cagtggttgacttacagtcgtaaagaatattgtgaactatgcaagcacagatttgcattc
acacctatctactctcccgatatgccgaagcgcctaccgattaaagacatctgtagtgga
ctggtcacgagtatggcaagagccattaggtattggtttcactatacacttgtagcattc
gcttggttgggcgtagttcctcttactgcctgtcgaatctatagatgtttatttactggt
agtgtcagttcattgttaactttaccattagacatgttatctacagaaaacctagcctct
gactgtttccaaggctgttttgtagtgacctgtacgctgtgtgcatttattagtctagtt
tggttacgtgaacagattttacatgggggaggtcctgattggttagaacaagataatcaa
caagccaatcaacagagggtaaataaatttgaatattcattgaattctccagccaatcag
aatgaaggtgggaataaccctgcagccaatgaaaatgaagaagaggttgaaggtgaagaa
gtggcagaaggcaatgatggtgctaaccatgaggccaataatgatgtcaataatgatgtt
aataatgataataatggtgcacaagatgataacaattggaatccaatagagtgggacaga
gcagcagaggagctgacttgggaaaggttactgggtttagatgggtctctggtattttta
gaacatgttttttgggtcgtttcactcaatacattgtttatcctagtatttgccttttgt
ccatatcatattggacattttacactagtggggtgtaaagttgatgatattgtatccgct
tcccattttgaaggattattaactacgatatcaggctatgttgtaattggtatagcatta
gttgtattatacttactctgttctcttgccaaactcaaaaaattccggcgtgtattagga
ctatgttatgtagtagtaaaagttatgttattagtcgtggtagaagtcggtgtctttcct
ctgatttgtggctggtggctggacatctgttccttgtctatgtttgatgccactttaaaa
gacagaaagacaagttttcacctggctccaggtacctctatgtttattcactggctagtc
ggaatggtgtatgtattttactttgcgtcgtttatcttactgctacgagaagtacttcgt
cctggtgttctctggtttctacgaaatctcaacgaccctgaatttaatcccattcaagag
atgatacatctaccagtttatcgacatgtgagaagatttattgcctcagtgataatattt
ggaagtactgtattgttaatgttatggttgcctgtaagagtgataaagaaagtcttcagt
acatttctgccataccatgttatgttatcgagtgatgccccagtgagtgagctgtctcta
gaactattattactacaagtggtattaccagccctcttagaacagggtcatactagactg
tggatgaaaggaatggtacggggttggactgtagctgtagcctggttgttgaatcttaga
tcttatcttattggtgatgaagatgttatccatggtgatcaaccagccccgccccaagcc
aataacgtccatgctaataatgtagccccacccccagcacagcctcagggtgagggttta
ggtgctgcccatcaggccatgttacaaggtggtggacccacaggattccagccatacaag
agaccctctatatttgctgccagggttattatgctagtgatcttaatgtgtgttacttta
tttgctgctagtctgttttcacttacactgccagtatttatcgggcgtcgtttgatgtca
atttggatgggagatgttaagatacacgagttatatactgcagcttgtggattgtatgtt
tgttggttaagtctgcgaatatcgttatttctgtataactggatcccacagggttataat
gtcatcatagtcaaacttaaacagtggtcattattggccttgaaatctattataatagct
gtaatgttaataggagcagtaccgttattactaggtttattatttgaactggttgtcgta
gctccattacgagtacctttggatcagtctccagtcttctttccatggcaggattgggct
ctaggtgtgttacatgctaaaattatctgtgcagtcactatgatgggaccacaatggtgg
ctcaaacaagccatggaacaggtatataatgatggattaaggaatttaaatctattgttt
atattaaaacatctgtgtttacctgtagtcagttctctaggaatggcgctatctgttcct
tatatcatagctaagtcatttgtacctatgttcgatgtagatgaggttacccagacgtta
gtagagagaagaatttatccgtatttattaagttgtataattatagtcagtgtatgtaca
ttccaactacgccagtttagacgtctttataaccatattaaagatgacaaatatttggtg
ggccagagattggtgaactatgaccccgtatcacgaaaatcacaatcacaaccacaagag
gctgtagtttcttga
DBGET
integrated database retrieval system
