Lottia gigantea (owl limpet): LOTGIDRAFT_215757
Help
Entry
LOTGIDRAFT_215757 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04145
Phagosome
lgi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
LOTGIDRAFT_215757
09142 Cell motility
04814 Motor proteins
LOTGIDRAFT_215757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_215757
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgi04812
]
LOTGIDRAFT_215757
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
LOTGIDRAFT_215757
Cytoskeleton proteins [BR:
lgi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
LOTGIDRAFT_215757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
WD40
WD40_WDHD1_1st
WDR55
Dynein_IC2
Beta-prop_EML_2
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
20246593
NCBI-ProteinID:
XP_009055105
JGI:
215757
UniProt:
V4AKY9
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MADRKAELERKKARLEQMRRERQEKVRQKTGATEGEEGKPKVQKDLRAETDDLLRDLGIP
EPSSVQTTVSKTPTGGEQVVHTVSTSSRAKVKLSLCKVNETSIAPREQVSYSKETQTINA
EPIDKDVKMVEPKTAEEEKKEEVGKFLFRELSEEEKQLIINDPEFNVFFTKTTRIVERAL
AENYDILVDYSGGDGENKDDDVLAGERLKLNRTFYDDRWSRHRTVTSLDWSIQHPELIVA
SYNVNEDSPHDPDGIALIWNTKFKKTTPEYIFHCQSALMSTCFAKFHPNLVVGGTYSGQI
VLWDNRVNKRTPIQRTPLSAAAHTHPVYCVNVVGTQNAHNLISVSTDGKMCSWSLDMLSQ
PQDSMELQHKQSKAVAVTSFCFLSGDVNNFVVGAEDCTVYTACRHGSKAGINDSFDGHQG
PITAVDCNSVQGQIDFSPYFLTSSFDWTIKLWSIKDQKFIHSFEDNSDYVYGVEWSPIHP
ALFASVDGNGRLDLWHLNNETEVPTASTVIDGNVALNTCRWHQSGHMISVGDDMGKIHTY
DVGEHLANPKPQEWSKFVHTLTELKQHAVEREDDSNLALR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgaaaagccgaactagagcgaaagaaagctcgtctggagcaaatgagacga
gaaagacaggagaaagttcgacagaaaaccggggctactgagggcgaagaaggaaaacct
aaagtacagaaagatctacgtgctgaaacagatgatttgcttcgtgatttgggaattcca
gaaccatcttcagttcaaacaactgtgagtaaaacaccaacaggtggggagcaagttgtg
catactgtttctacaagctccagagcgaaggtgaagctgagtttatgtaaagtaaatgaa
acaagtatagctccccgagaacaagtttcatacagtaaagagactcaaacaataaatgca
gaacccattgataaggatgttaaaatggtcgaaccaaaaacagccgaagaagaaaagaaa
gaagaagttggtaagtttctttttcgagagttatcagaagaagaaaaacagctgataata
aatgatccagaatttaatgtatttttcacaaaaacaactcgtattgtggaaagagctcta
gctgagaattatgatattttggtggattattctggaggagacggagaaaacaaagatgat
gatgtattagctggggaaagattgaagttaaatcgtacattttacgatgaccgttggtct
agacatcgtactgtcaccagtttagattggtccatacagcatccagaattaattgtagca
tcatataatgtaaatgaagattctcctcatgatcctgatggtattgctttgatctggaac
accaaatttaaaaagacaacccctgaatatatcttccattgtcagtctgcattgatgtcg
acatgttttgccaagtttcatcctaacctagttgtaggtggaacctattctggacagatt
gtgttgtgggataaccgtgttaataaaagaacacctatacagagaacaccactttcagct
gctgcccatacacatcctgtatattgtgttaatgtagtggggactcagaatgctcacaat
ctaatcagtgtatctacagatggtaaaatgtgttcatggagtttagatatgttatctcaa
ccacaggacagcatggaactacaacataaacagagtaaagctgtagcagtgacaagtttc
tgttttctgtctggagatgtgaataattttgtagtaggagctgaagactgtacagtttat
actgcatgtcgacacggcagtaaagctggtattaatgattcatttgacggccatcaagga
ccaatcacagctgtggattgtaattctgtccagggtcagattgacttctctccatatttc
ttaacttcctcgtttgattggacgatcaaactatggagcatcaaggaccagaagtttatc
cattcatttgaagataacagtgattatgtatatggtgtagaatggtctcctattcaccct
gcattattcgctagtgtggatggtaatggccgactggatctctggcaccttaataatgaa
acagaggttcccacagcttcaactgttattgatggtaatgtggcattgaatacctgtcgc
tggcatcaaagtggtcacatgatcagtgtgggagatgatatgggaaaaatacatacttat
gatgtgggagagcatttggcaaatccaaaacctcaagaatggtccaagtttgttcatacc
ttaacagagttaaaacaacatgctgtggaaagagaagacgactctaatctagctttacga
taa
DBGET
integrated database retrieval system
