Lottia gigantea (owl limpet): LOTGIDRAFT_215952 Help Entry LOTGIDRAFT_215952 CDS       T03273                                  Name (RefSeq) hypothetical protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism lgi  Lottia gigantea (owl limpet) Pathway lgi04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lgi00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     LOTGIDRAFT_215952  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lgi04131]     LOTGIDRAFT_215952 Membrane trafficking [BR:lgi04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     LOTGIDRAFT_215952 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_VPS8 TPR_Vps8 VPS8_N zf_RING_Vps8 TPR_VPS8_2 TPR_Vps41 WD40_CDC20-Fz Clathrin zf-RING_Vps41 WD40_Prp19 WDR55 Beta-prop_EML_2 zf_RING_Vps8_fungal ANAPC4_WD40 Beta-prop_RIG_2nd Prok-RING_1 zf-RING_11 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_HPS5 BRX_N PHD Beta-prop_NWD2_C EIF3I Motif Other DBs NCBI-GeneID:  20246604 NCBI-ProteinID:  XP_009055758 JGI:  215952 UniProt:  V3ZQ91 LinkDB All DBs Position Unknown AA seq 1311 aa AA seqDB search MWSTHWLCPPLLFRKKLPKKPVHGSVLRPCRLKSLSAQLLSAADRVDAGMPTAIAVANLI AIGCSHGLVLVFDPKQVLKWCLGSTAVGSQYGSVSALSFNRDCSRLLCGFAKGQITMWDL TNGKLIRTITDAHPQGTAILHVKFTDNLTLAVCSDSGGSVFELEFKRLIGVRTCESKCLF SGSRGEVCVIEPLHMNYTIKDHPMQDVTVLAMASLSKVLLVTLRPNLKVMFMQPLKGDAS TLPLLAWQFVVIQVSEEDRVIDPVLAYGRDQTIYFYQVICKGPQDIRCSGLQKIDLPYKL LSINWMNARTLVTLDKTEKLHVIDVRSEEELEVIDISDVQLVYGSSFFKSLATGGNVSQA LAYAGEQACYQSIVSHSSQLFTLGTKTVSVYNIRSWNERIDVLVKQNKYHEALSLALSFY DGKAKAVVSLTSSSSKRRDIVSHLILELLFDYVDLSMTKLCPDKGKIEALEEYYQEIVPV CVDYCLHLNRTDVLFGRIYERFGEDIIAKGTFLECLEPYILNDKLCAIPPAVMKDFVCNY EEKGMLDSVEACIVHLDIASLDIHQVVNLCWGHGLYDAIIYVYNQGMLDYATPLEELLML LSEAVSAGKPLSNDQIKLGNKLLVYISCCLAGRAYPLGDIPTDHIEDVKNKVFECITCLH TKKPGSEEPTYPHLRTLLQFDTREFLNVLALAFEESEFNTERGVQKRQRLVDILLKIMVE SVGFTPTQVGVLFTFLARQMARHENTIIVNRVLFEQVLEFLSNPEDESRHEERQQALMEL IHAGGLKQFNEDKLLRLAENAKFYRVCEYLYEKRREYDKILSCYLKDPSRRYHAFNYITS IIDSDRTESEKNSVRREALKSLEDLVSIDCKQAAHTVITSLASNLKDIVDKLSSKPTLLF EFLQGVISYRDAQGSAINPDKQVNIEAEIVEKYISLMCQFKPGEVYNFIKATEGYRLEET LAICREYKVSEATAYLLEKAGDIHGAFRIMLESVQYKLKIFTQSVQSTEQTINNKVLFAE VEAVLLVIIQLCQRNSGKMDESGRESLWFPLLEAIMSPLRKLKDHVDKQILEDFKEMTRH VLNSMMGYISPPAILQKIVQDPAYNTGKFGEVKELIIGMLDNYNYEQTLMKTCKNLLNHD LHVHMRNLTKAANKGFVPRGENCQLCDRSFTSSTDSDNVIVFRCCHSYHLQCLRSVGSIH VIEGFETWVCFTCNNARKTGRLQSSRFHRYLSNPQATQTSSQKSRENLMDPQHAQDFEYI RKSMKTKSRLAIMTELSKPEQSRTDYTRTKSTIFNHESFQLKLSPPPPMEL NT seq 3936 nt NT seq  +upstreamnt  +downstreamnt atgtggagcacacattggttatgtccacctttactcttcaggaagaaattaccgaagaag ccagtacatggttcagttttacgaccatgtaggttaaaaagtttgtctgctcagttattg tctgctgctgatagggttgatgctggtatgccaactgccattgctgtagctaatttgata gcgattggatgttcacatggtttggttctagtctttgaccctaaacaagtattaaaatgg tgtttaggtagtactgctgttggttctcaatatggttcagtatcagctcttagtttcaat agagactgctccagactgctgtgtggcttcgctaagggacagattaccatgtgggatctt accaatggtaaattaatcagaactataaccgatgctcatccacaaggaacagctatatta catgtgaagttcacagataatttaactctagctgtttgtagtgatagtggtggctcagta ttcgaactagaattcaagagattaattggcgttagaacttgtgaatcgaaatgtttattc tctggaagtcgaggtgaagtgtgtgttattgaaccattacatatgaactatacaatcaaa gatcatccaatgcaagatgttacagttctagctatggcttccttatcaaaggttttattg gtaacattaagaccaaatttaaaagtaatgttcatgcagccattaaagggtgatgcctct acattaccattattagcttggcagtttgtggtcattcaagtatcagaggaagacagagtt attgaccctgttttagcctatggtcgagatcaaacgatatatttttaccaagttatatgt aaaggtcctcaagacattagatgttctggtctacagaaaattgatcttccttataaacta ctcagtattaattggatgaatgccagaactctagtaacgcttgataaaacagagaaatta catgtcatagatgtacgctcagaggaggagctagaggtaatagatattagtgatgtacag ttggtgtatggatcgagtttctttaaatcgctagctactggtgggaacgtcagccaggcg ctggcgtatgctggagaacaggcgtgttatcaatctattgtatcacattcctctcaacta tttacattgggaactaaaactgtcagtgtttataatattagatcatggaatgagagaata gatgtattggtgaaacagaataaataccatgaagctttaagtttagctctatctttctac gatggtaaagctaaagctgttgttagcttaactagttcctcctcaaaacgtagagatatt gtctctcatttgattttagagttattatttgactatgtagatttatcaatgactaagcta tgtcctgataaaggtaaaatagaggcactagaagaatactatcaggaaatagtaccagtt tgtgtagattattgtcttcacctcaacagaactgacgtattatttggtagaatatacgaa cgtttcggtgaagatataatagctaaaggaacctttctagaatgtttagaaccttatata ttaaatgataaattatgcgccatcccaccagctgtgatgaaagattttgtatgtaattat gaagagaaggggatgttagatagtgtagaagcctgtatagttcatttagatatagccagt cttgatatacatcaggttgttaatctatgctggggtcatggtctatatgatgccattatc tatgtatataatcaaggaatgctggactatgctactccattagaggaactgttaatgtta ctaagtgaagctgtatctgcaggcaagccattgtcaaatgatcaaattaaactaggaaat aaattattagtgtatataagctgttgtttggctggtcgagcctatcctctgggtgatata ccaacagatcatatagaagatgttaaaaataaggtatttgagtgtatcacatgtctacat actaagaaaccaggatcagaagaaccaacctatcctcatcttagaacattattacaattt gatacgagagaattcctgaatgttctagcattggcatttgaagaatcagaatttaacaca gaacgaggagttcagaagcgccagagattagtggatattttattgaaaattatggtagaa agtgttggatttactccgacccaagttggagtattgtttacattcctagcaagacagatg gctagacatgaaaatactataattgtaaatagagtcttgtttgaacaggtgttggagttc ttgtcgaacccagaagatgaatcacgtcatgaagaacgtcaacaagctctgatggaactg atacacgctggtggtctgaaacaatttaacgaagataaattactcagactggctgaaaat gctaaattctatcgtgtctgtgaatatttatatgagaagagaagagaatatgataaaata ttatcatgctatttaaaggacccatcaagaagataccatgccttcaactatataaccagt attatagacagtgatagaacagagagtgagaagaacagtgttagaagggaagcattgaaa agtttagaagatttagtgtctatagactgtaaacaggcagcccatactgtcatcaccagc ctagctagtaatttaaaagatattgtagacaaactatcatccaaacctacattattgttt gagtttctacaaggagtcatttcttatagagatgcccaaggaagtgctatcaatccagat aaacaagtaaatatagaagctgaaattgttgagaaatatatttcattgatgtgtcagttt aaacctggtgaagtttataattttattaaagctactgaaggttatagactagaagaaaca cttgctatttgtcgtgaatataaagtatccgaggctacagcttatttactggagaaggca ggagatatacacggtgcttttagaattatgttagagagtgtgcaatataaactgaaaata tttactcaaagtgtacaatcaacagaacaaactattaataataaagtgttatttgctgaa gtagaagctgtattattagtgattatacaactctgtcagagaaactcaggtaaaatggat gaaagtggtagagagtctctatggtttccgttattagaagcaatcatgtcacctttaaga aaattgaaagatcatgtggataaacaaatattagaagattttaaagagatgacccgccat gttttgaacagtatgatgggatacatttctcctcctgcaatactgcagaaaattgtccag gacccagcgtataatacgggtaaatttggtgaagtaaaagaattaataataggaatgtta gataactataattatgaacagactctaatgaagacgtgtaaaaatctgttgaatcacgat ctacatgttcatatgagaaacttaacgaaggctgctaataaagggtttgtaccaagggga gagaactgccagttatgtgacagatcatttacaagttcaactgattctgataatgttata gtctttaggtgttgccatagttaccatctgcaatgtttacgttctgtaggatcaattcac gttatagaaggatttgaaacgtgggtgtgttttacgtgtaataatgctcgaaagactggt agactacagagttcacgatttcatagatacctttctaatcctcaggctacacagacgtca tctcaaaaatcaagagagaatctgatggatccacagcatgcccaagattttgagtatatt cgaaagtccatgaagactaaatctagacttgctataatgaccgaactttccaaaccagaa caatctcgcacggattatactcgtaccaaatccaccatttttaatcacgagagttttcaa ttaaaactttccccaccaccaccaatggagctgtag

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