KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_215976
Entry
LOTGIDRAFT_215976 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K06100  symplekin
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOTGIDRAFT_215976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_215976
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_215976
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     LOTGIDRAFT_215976
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     LOTGIDRAFT_215976
    U7-dependent histone pre-mRNA processing factors
     LOTGIDRAFT_215976
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N Cnd1 DUF4780 FliL
Other DBs
NCBI-GeneID: 20246608
NCBI-ProteinID: XP_009055787
JGI: 215976
UniProt: V4AJ75
LinkDB
Position
Unknown
AA seq 1162 aa
MTRDVDKIKYLRQVQELIIHKDPTLLDNFLDEMLAFISDRSVDVKKLLIGFLEEACKKDK
EILPKALPGVTILLADDNANVKKKVILSLTSIFKYSLQWIAKAKTPSSEMTSVWENMMKT
KKQVLELLESENDGIRTHVVKFLEGVVLVLSKRSTDSMIPKNMEGDITLDQIPESNTYLK
VNKLEEDGKKSFILLLQFQASPHISSINLMTVMGALTNIAKQRPIFLDQVVQGLEALHVN
LPPTLAKSQVSSVRKNLKMQMLALLKHPASVDHLTQITTLLTDLGASQSEINKNMPKMDE
NRKRKLEQTSTSTSKKAKVEIDLDDDEVQMTPFVPQGIKRAPSVSQRQTAIDITAEDILP
KLNSQNVADLVLLSMVMLPDTMPAQFESTYTPIAAAGTEAQIAHLARLLATQLTMAGFGR
GLGELQRKFLEEGVKDDGSTTPASPMDASYPSPKQLIQTLVGGTTNLEDSGTDNKPSSSS
STGVPGSFLQPSMPAAPRKLRQFKLSTITNPLDAGKIDEMTIATMKRVLTAETIAQNNNI
TSVRVKILATLTAQFGGGLKDMLQTFIFEDLKTRSDIAFAWLYQEYANCQGFISVADPQT
DKNSLASYDECLTRLLSMLLDRPDQRDGLFSRLILEAPVVTDNAVEMLRRYSANESQTQN
GMETLRKLILMRPNRRLHFLDVLLEFTGHDQPEVRNKAIEITKTLLEKYQLNSPIETYAL
NNLKKLLLPKPLPEFFTGAKAKDVQEEWTEECIKMHLYLYLGLLPTNHSLIHELSNVYTA
TSADVKRAILRMLESPVKGMGMDSPELLTMVENCPKGAETLVMRVIHILTDKSAPSPELV
EKIRDLYHKRVPDVRFLIPVLTGLTKKEVTGALPKLIKLNPVVVKEVFHRLMGGHGESSV
AYTSPLTPAELLVALHNIDPSKCDMKTVIKAANLCFSEKTIYTTEVLAIAMQQLMEINPL
PTLLMRTVLQSLSMYPRLIGFVLNILHRLITKQVWKQQKVWEGFIKCCQKTKPQSFQVLL
QLPPQQLQGVFEIAPDLRSPLYTHVQSLTPHQQAHISKAVLSTLENDPYAEQRVKDEEKQ
RQDKENAEKLQIEKELANREKAERMRLEKEKADKEKAEKVKKEREKAENERKERERKMAD
DIRKKQEEREAADRARRDAKRR
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgacacgagatgttgacaaaattaaatatttaagacaggttcaagagttgataattcat
aaagatcctacactgttagataactttctcgatgaaatgttggcctttatcagtgataga
tcagtagatgttaaaaaacttctgattggctttctagaagaagcttgtaagaaagataaa
gaaatcttaccgaaagctctaccaggagtaactatattattagctgatgataacgctaat
gttaaaaagaaagttatcttgtctttaactagtatatttaaatacagcttacagtggata
gctaaagcgaagactcctagttcagaaatgacgtctgtttgggagaatatgatgaaaact
aaaaaacaagttttagaattgttggagtctgaaaatgatggtatacgtacccatgttgtt
aagtttctagaaggagtggttttagttttatcaaaaagatcaacagactcgatgataccg
aagaatatggaaggggacataactctagatcagataccagaatcgaacacgtatttgaag
gttaataagttagaggaggatggaaagaaatcgtttattttgttgttacaatttcaagct
tcaccacatatatccagtattaacctgatgactgttatgggagcattaactaatatagct
aaacaaagacctatattcttagatcaagttgtacagggtttagaggctttacatgtaaat
ttaccgccaacgctggctaaatctcaagttagtagtgttcgtaaaaatttaaagatgcag
atgttagctctattaaaacatcctgcgtctgttgatcatctaacacagattactacattg
ttaacagatcttggtgctagtcagtcagagataaacaaaaatatgccaaaaatggatgaa
aatcgaaaaagaaaactggaacaaacgtcaacatcaactagtaaaaaagctaaagtagag
attgatttagacgatgatgaagtccagatgaccccattcgtaccccagggtataaaacgt
gccccgtctgtctcccagcgacaaactgctatagatattacagcagaagacattctacct
aaacttaactcccagaatgttgctgatcttgtattacttagtatggtaatgttaccagat
acaatgccagcccagtttgaatcaacctatacaccaatagcagccgctggtacagaggct
cagatagctcatttagctcgattgttagctactcagttaactatggctgggtttggtcga
ggtctgggagaacttcaacgtaaatttttagaggaaggagtaaaagatgatggtagtact
accccagcctctcctatggatgctagttacccatcacctaaacaacttatacaaactcta
gttggtgggacaactaatctagaagacagtggtactgacaataaacctagtagtagtagt
agtacaggtgtaccaggatcctttctacaaccctctatgcctgctgcccctcgtaaatta
cgtcagtttaaactatcaactataactaatccattagatgctggtaaaatagatgagatg
actatagctactatgaaacgtgtactgacagctgaaactattgctcagaataataacatt
acttcagtcagagttaaaattctcgctacattaacagctcagtttggtggtggactcaag
gacatgttacagacgtttatttttgaagatttaaagacacgtagtgatatagcgtttgcc
tggttatatcaggaatatgctaattgtcagggctttatcagcgtggctgatccacagaca
gataaaaatagcctggctagttatgatgagtgtttaactagattgttaagtatgttatta
gataggccagaccaacgagatggtttatttagtcgattgatattagaggcaccagtagta
actgataatgctgttgaaatgttacgtagatacagtgccaatgagtcacagacacagaat
gggatggaaacattaagaaagttaatattgatgagacctaatagaagattacattttcta
gatgttttactagagtttacaggtcacgatcaaccagaggttagaaataaagctatagaa
ataactaaaacattactagaaaaatatcaacttaattctcctatagagacgtatgccctc
aataatctgaagaaacttcttctaccaaaacctttaccagaattctttactggagctaaa
gcaaaagatgtccaagaagaatggacagaagagtgtattaaaatgcatctttatttatat
cttggtttattaccaactaatcattctcttatacacgagttatctaatgtttatacagct
acgtcagctgatgttaaaagagctatattacgtatgttagaaagtccagtaaaaggtatg
ggtatggactcacctgaattattaacaatggtagaaaactgtccgaaaggtgctgaaaca
ttagtgatgagagttatacatattctaacagataaatctgccccgtcaccagaactagtc
gagaagattcgagatttataccataaacgtgtacctgatgttagatttttaatacctgtt
ctaacaggtcttactaagaaagaagtaactggagctttacccaagttaatcaaactaaac
cctgttgttgttaaagaagttttccatagattgatggggggacatggtgaatcgtctgta
gcctatacatctcctctaacaccagctgaactattagtagctctacataatatagatcct
tccaaatgtgacatgaaaacagttattaaagctgccaacctgtgtttcagtgagaagact
atatatacaactgaagtattagctatagccatgcaacagttgatggagataaacccactg
cctaccttgttaatgagaactgttttacagtcgttatcaatgtatcctagattaatcggc
ttcgttttaaatattttacatcgtctaattactaaacaggtttggaaacaacagaaggtc
tgggaaggatttataaaatgttgtcagaaaactaaacctcaatcattccaagtgttatta
caactaccaccccagcagttacagggtgtgttcgagatagctcccgatttgcgttcaccg
ctttacactcatgttcaatcccttactccccatcagcaagctcatatatcaaaagcagtg
ttatcaactttagaaaatgacccatatgctgaacaacgtgtcaaagatgaagaaaaacag
agacaggacaaagaaaatgctgaaaaattacagattgagaaggaattggcaaatagagaa
aaagcagaacgtatgagattagagaaagaaaaagctgataaagaaaaggctgaaaaagtt
aaaaaagaacgagagaaggctgaaaacgagaggaaagaaagggaacgaaagatggcagac
gacatccgaaagaaacaagaagaaagagaagcagcagatagagcgagacgagatgccaag
agacgg

DBGET integrated database retrieval system