Lottia gigantea (owl limpet): LOTGIDRAFT_216289
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Entry
LOTGIDRAFT_216289 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_216289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_216289
03012 Translation factors [BR:
lgi03012
]
LOTGIDRAFT_216289
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LOTGIDRAFT_216289
Translation factors [BR:
lgi03012
]
Eukaryotic type
Release factors
LOTGIDRAFT_216289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
20246631
NCBI-ProteinID:
XP_009056254
JGI:
216289
UniProt:
V4AI12
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MASNGTEGETSADRNVEMWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVNKMLADEY
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIITEEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIIMDGNGALFGTLSGNTREILHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFITNDKPNVAGLVLAGSADFKTEL
SQSDMFDQRLQAKILKIVDVSYGGENGFNQAIELAADSLANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVEDTLRALEMGAVDTLIVWENLSITRFVVRDHSTEENRILFLQPDQESDKTN
FTDKDTGVEMEMVEQVSLLEWFANNYKNFGATLEIITDKSQEGAQFVRGFGGIGGILRYQ
VDFQMFHPDLQEYDDFDIDDY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaatggaaccgaaggtgaaaccagtgccgacagaaatgtcgaaatgtggaag
ataaagaaactcataaagagtttagaagcagctagaggaaatggaacgagcatgatatct
ctgatcattccaccaaaagatcaagtttcacgtgtaaataaaatgttggctgatgaatat
ggtacagcatcaaatatcaaaagtcgtgtcaatagactctctgtgttaggagctatcacc
tctgtacaacaaagactcaaattatacaataaagttcctcccaatggtttagttatatat
tgtggtacaattataacagaagagggcaaagaaaaaaaagtcaacatagattttgaacct
ttccgccctatcaacacctcattatatttatgtgacaataaattccatacagaggccttg
actgcattattagctgatgataataaatttggtttcattattatggatggtaatggtgct
ctttttggaacattatcaggaaatacgagagaaatcctccataaatttactgttgattta
ccaaagaaacacggtagaggaggtcagtcggcattgcgttttgcccgattgagaatggaa
aaacgtcacaactatgtacgtaaagtagctgaagttgctgtccaattatttattaccaat
gataaacctaatgtagctggattagtattagctggttctgctgattttaaaactgaactt
agtcaatctgatatgttcgatcagagattacaagctaagatattgaaaatagtagatgta
tcatatggtggtgaaaatggttttaatcaggctatagaattagcagctgattcattagct
aatgtcaaatttatacaagaaaaaaaattaatcggtcgatattttgatgaaatatctcaa
gatacaggaaagtattgttttggtgtagaagatacattaagagctctagaaatgggagct
gttgatacccttattgtatgggaaaatcttagtattactagatttgtggttcgtgatcac
tcaacagaagaaaatcgtattttatttttacaacctgatcaagaatctgataaaaccaat
ttcacagacaaagacacgggtgttgaaatggaaatggttgaacaagtatccctattagaa
tggtttgctaataattataaaaactttggtgccacattagaaattattacagataaatcc
caagaaggtgcccaatttgtgagaggatttggtggaattggaggtatattacggtaccaa
gtagatttccagatgtttcatccagacttgcaggaatatgatgattttgatatagatgat
tattaa
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