KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_216798
Entry
LOTGIDRAFT_216798 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_216798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_216798
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_216798
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     LOTGIDRAFT_216798
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    LOTGIDRAFT_216798
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_RSE1_2nd Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR75_1st NBCH_WD40
Other DBs
NCBI-GeneID: 20246662
NCBI-ProteinID: XP_009056915
JGI: 216798
UniProt: V4A6N0
LinkDB
Position
Unknown
AA seq 369 aa
MSIFGGTSSFGTPTVFGQSTAQTPKNLNPMKDFEVTSPPDDSVSCLKFSPGTLPSTFLIA
GSWDNNVRCWEIQQNGQTVPKAQQSHTGPVLGVDWSDDGTKVFTASCDKTAKMWDLSSNQ
FMQVAVHDAPIKTVHWIKAQNYSCLMTGSWDKTLKFWDTRSPNPILSIQLPEKVYCADVK
YPMAVVGTSNRGIIIYQLENQPREFKRVESQLKYQSRCISIFMDKKTNTPTGFALGSIEG
RAGIQYVNPTNPKDNFTFKCHRSNGASGSMQDIYAVNDIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKSSELFDQPITCCNFNAQGNIFAYATSYDWSKGHEGYDPQKMKPHIFLRSCF
EEFKPSTKR
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtatatttggaggaacttcttcttttggaactcctactgtttttggacaatctaca
gctcaaactccaaagaatctaaacccaatgaaggactttgaggttacatctcccccagat
gatagtgttagttgtttaaaatttagtcctggtactttgccttcaactttccttatcgct
ggtagttgggataacaatgtacgttgttgggaaattcaacaaaatggacaaactgtacca
aaagctcaacagtcacatactggacctgtattaggggttgattggagtgatgacggaaca
aaagtcttcacagcctcttgtgataaaacagctaaaatgtgggatttaagtagtaaccag
tttatgcaagtagcagtgcatgatgctcctatcaagactgtacattggattaaagcacaa
aattacagttgtttaatgactggtagctgggataaaacattaaagttttgggacactaga
tcacctaatcctatcttgtcaattcaactaccagagaaagtttattgtgctgatgttaaa
tatccaatggcagtagttggaacgtctaatagaggaatcattatttatcagttagaaaat
caaccacgagaatttaaacgtgtagaatcccagctaaagtatcagtctcgttgtattagt
atatttatggataagaagaccaacacaccaacaggatttgctctaggaagtattgagggc
cgtgctggtattcaatatgttaatcctaccaaccctaaagataattttacctttaaatgt
cataggtctaacggtgcatcaggcagtatgcaggatatttatgcggttaacgacatagca
ttccatccagttcatggtactttagctacagtaggttcagatggtagatttagtttctgg
gataaagatgctagaaccaaactgaagtcttcagaattatttgatcaacctattacatgc
tgtaattttaatgcacaaggaaatatctttgcttacgctaccagctatgattggtcaaag
ggacatgaaggctatgatcctcaaaaaatgaagccacatattttcttacgttcctgtttc
gaagaattcaagccatcaacaaagagataa

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