KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_217825
Entry
LOTGIDRAFT_217825 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03030  DNA replication
lgi03410  Base excision repair
lgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOTGIDRAFT_217825
   03410 Base excision repair
    LOTGIDRAFT_217825
   03420 Nucleotide excision repair
    LOTGIDRAFT_217825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lgi03032]
    LOTGIDRAFT_217825
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_217825
Enzymes [BR:lgi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOTGIDRAFT_217825
DNA replication proteins [BR:lgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    LOTGIDRAFT_217825
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      LOTGIDRAFT_217825
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Lipo_LenA
Other DBs
NCBI-GeneID: 20246738
NCBI-ProteinID: XP_009058679
JGI: 217825
UniProt: V4A1X9
LinkDB
Position
Unknown
AA seq 2262 aa
MEKKIFVIYSRREDSTEKRLQKANQNDEIDLRFGYERYKDPQEITGWLINMHPTDILDGN
KRLISAVDYYFLQEDGGRFKATLPFKPYFYVITKKDCEREVASFLTRKFSGKISAIESVT
KEDLDLANHLVGLKRKMLKLSFLSVEELNKVKREVFSAIKKNKEREKANDAYTSMLTSHL
TGEENSVSKKLSDQMENMMDIREYDVPYHVRVSIDKEIFVGHWYTIRGRGSEPPEITRRD
DLVDRPDPVVLAYDIETTKLPLKFPDSATDQIMMISYMIDGQGYLICNREIISQDVEDFE
YTPRPEFEGPFIIFNEPDEIATIQRFIDHILEVKPHIYVTYNGDFFDWPFVEARAGFHGI
DLEREIGVTKDTQGEYKSRTSIHMDCFKWVKRDSYLPVGSQNLKAVAKAKLRYDPVELDP
EEMCRLASEQPQVMANYSVSDAVATYYLYMKYVHPFIFALCTIIPMQPDEVLRKGSGTLC
EALLMVQAYHANIVFPNKQESILNRLTDDGHVLDSETYVGGHVEAIESGVYRADVPTRFR
MVPEAFQTLIDNVDRTMKFCIEVEEKIPIDQVTNFQEICDDVKEKLAMLRDCPNRLENPI
IYHLDVGAMYPNIILTNRLQPPAIVDEATCAACDFNKPGAKCQRDLSWMWRGEFMPASRN
EFHRIQQQLENEKFPPFFPGGEQRAFHQLNREEQATIEKKRLADYCRKAYKKTKSTRMEE
RVATVCQRENSFYVDTVRAFRDRRYEFKGLTKVWKGKLSDAEKKKDAAEIKKANGMVVLY
DSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANIICRAREIVEQIGRPLELDT
DGIWCILPATFPENYVVKSTNPKKSKVTISYPGAMLNIMVKDVFTNDQYQELEDPVAMKY
SVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQL
IKIFQSSVFEAFLKGKTLEECYEAVAKIADYWLDVLYSKAANMPDSELFELIAENRSMSK
KLEEYGSQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISKKPEGAPVTERAIPLAIFQA
EPSIKRHYLRKWLKRQDLNDFDIREILDWQYYIERLGGTIQKIITIPAALQSVPNPVPRI
PHPDWLRKKLLERNDVFKQKKISEMFSVSARPVQDLVYSQGAIPSSQNGVKDIEDIGNKG
HNGNKNGMAISHKRKRIQSGNDSMDLTDSTQNTQQSQNWREALGPPPPMGKTKEERKIWV
EYHKKKWELQAKEKQDRKRQRTELDISTSMSTTPARGLGGFLRKTARSMMDMPWQIVQLA
ETSNPGQFKLWALIGSDLHAMKLVVPRIFYVNQKTPKQGEGELWKKSIKTLPRSHPVFNL
YQYSVPEDVYLQHINDINADLSSPDIEGVYETQVPLEFRALIQLGCVVTVNREFARQMSG
RETDTFEMDNLDFRTLAQFPYLETGSIKHLYFYHHACGTKQLYGLFLPMSKKGTVFVVDT
VRSDQMPNITALYNAERNNKVTKGADEDSLPPAGHTFEYKLEKDIRQVYRTIQRMLSAYK
DEKRGPTFIAVQSSLDFAHLVSVIPGLTDFPLVPIHIADSDNLYNVLDWQRVGCRRLFQH
YLNVDIILQAMMEQCRYLHIPIGNMPKDITLYGCDLFFARHLYKHNHLLWCSPTERPDLG
GKEADDNRLCMELQGSTPIELNNPGHYPTVCVELDITSLAVNTIIESGHVNDQEGASAAI
SFDTMPQSSLEDMVQGQGAATMLTSYDETALCSTTFRILKTMVHGWVRDVTTYSNVFADN
QIIHFYRWLRSPSSLLYDPALRRTLHNMMKKVFMQLIAEFKRLGSEIVYGNFNRLILCTK
KRQLVDALSYVEYITNSIKSRELFHLIDMSYEQCWELLMWLDQANYGGVRGKLTQNNNNN
NNNDDKKDDGDSDGEEIVAEQEEELNKSDSEDEPEVEMNWNMMLFLPESGACQTNFNMLI
AGYILSVYNQMLEEQRRFTPGNTPLHNRFDSSQTPVVIDTSATPSTITFSQNLVQGELAQ
QMFALTQKVQKKLSGNRSNHGDIEKFPQLPGSHLPLNNPALEFVKCVCKVLSLDSNVTIQ
VNKLKRDLLKLICVGEFSSESQYQDPCLSYILPEVICKSCNHVRDLDLCRDPYLCQDSPG
SSWACIQCHLEYDISEIEQSLLEAINRKSMSYILQDLKCSKCKGIKDNNMKKYCSCAGEF
SNTLDIEEYRKQLRTFRGIARHYKMVLLLETVEWIMKMNPGL
NT seq 6789 nt   +upstreamnt  +downstreamnt
atggaaaaaaaaatatttgttatatattctaggagagaagattcaacagaaaaacgacta
cagaaagcgaatcagaatgatgagatagacctaaggtttggttatgaacgttacaaggac
cctcaagagatcaccggatggcttatcaatatgcatccaacggacatcttggatggtaat
aaaagattaatctcagctgttgattattatttcttacaagaagatggtggccgttttaag
gctacattgccatttaaaccctacttctatgtcattactaaaaaagattgcgaaagagag
gtagcctccttcttgaccagaaaattctcagggaagatctcagccattgaaagtgtaacg
aaggaagacttagatttggctaaccatctagttggtttaaaacgtaaaatgttgaagttg
tcgtttctcagtgtagaagagttaaataaagtgaaacgtgaagttttttctgccattaag
aagaataaagaaagagaaaaggcgaatgatgcctatactagcatgttgaccagccattta
actggtgaagagaattcagtatctaagaaactctctgatcagatggaaaatatgatggac
attagagaatatgatgtgccgtatcacgtacgagtatctatagataaagagatctttgta
ggacattggtatacaatacgagggcgaggtagtgagccaccagaaataacacgtagagat
gatctcgtagatagaccagaccctgtagtattagcttatgatatagaaacaactaaatta
ccattgaaatttcctgattctgccactgatcaaattatgatgatttcttacatgatcgat
ggacagggttatttaatctgtaatcgtgaaataatctctcaagatgtagaagattttgaa
tatacaccgagaccagaatttgaaggaccatttataatctttaatgaacctgatgagata
gcaaccattcagagatttatagatcatatattagaagtgaagccacatatttatgtcaca
tataacggtgattttttcgactggccgttcgtagaagcgagagctgggtttcatgggatt
gatttagaaagagaaatcggagtaactaaggatactcaaggcgaatataaatcacgaacc
agtatccacatggattgtttcaaatgggtaaaaagagacagttatttaccagttggtagt
caaaatttaaaggctgttgccaaggctaaattacgttatgacccagttgaattagatcct
gaagaaatgtgtcgattggctagtgaacagccacaggtgatggctaattattcagtatct
gatgctgtagctacgtactatctctatatgaaatatgtacacccgtttatatttgccttg
tgtactattatacctatgcaaccagatgaggtattaagaaagggatctggtactctatgt
gaagcgttattgatggtacaagcttatcatgccaatatcgtatttcctaataaacaagag
tctatattaaatcgtttaactgatgatggtcatgtccttgatagcgagacatacgttggt
ggtcatgtggaggctatagagtctggtgtttacagagctgatgttcctaccaggttcaga
atggtaccagaagcatttcaaacattgatagacaatgtcgacaggaccatgaaattctgt
atcgaagtagaggagaagatacctattgatcaagtcacaaattttcaggagatttgtgat
gatgtaaaagagaagttggcgatgttacgagattgtccgaatcgtttagagaatcctatt
atatatcatttagatgtcggggctatgtatcctaatattattctaaccaatagattacag
cctcctgctattgtagatgaagcaacatgtgctgcctgtgattttaataaacctggtgcc
aaatgtcaacgagacttatcttggatgtggcggggagaattcatgccagcctccagaaat
gaattccacagaatacaacaacaactagaaaatgagaagtttccgccatttttccctgga
ggtgaacagcgagcttttcatcagttgaaccgagaggaacaggccactatcgagaaaaaa
cgtcttgcagattactgtcgtaaagcttacaaaaagacaaaatcaacgcgtatggaagaa
agagtagctactgtctgtcaacgagagaactcgttctacgtggacacggtccgtgctttc
cgtgatagacgttacgaatttaaaggattaacgaaggtgtggaaggggaaactatcagac
gctgagaaaaagaaagacgcagcagagattaaaaaagctaatggaatggttgtcttgtat
gattccttacagttagcccataaatgtattctgaactcattttacggttacgtcatgaga
aagggtgcaagatggtacagtatggaaatggctggaattgtctgttatactggagctaat
atcatctgtagagctagagaaatagtcgaacaaattggtcgtccattagagttagataca
gatggtatatggtgtatattgccagcaacctttccagagaattacgtggtaaaatcaact
aatccaaaaaaatcgaaagtcactatttcttatcctggtgctatgttaaatatcatggtc
aaggatgtttttaccaatgatcaatatcaggagcttgaagatccagtagccatgaaatat
tctgtacgcagtgagaactctatattctttgaagtagatggaccatatttagccatgatc
ctaccggcatctaaagaagaagggaagaaactgaagaaacgttatgccgtgtttaatttc
gatggaagtttggctgagttgaaaggattcgaagttaaacgacgtggagagttacaactc
attaaaattttccagtcctcggtgttcgaggcgtttttaaaaggaaagacgttagaagag
tgttacgaagctgtggctaagatagctgattactggctggatgtgttgtacagtaaagct
gccaatatgccagattctgagttattcgaacttatcgcggaaaacagaagcatgtctaag
aaattagaggaatatggaagccagaaatcaacttctatcagcactgctaaaagattggct
gaattcctcggtgatcagatggtaaaagacgccggtctgagttgtcgttacgttatttct
aagaaaccagaaggggcacctgttacagagagagcaataccattggctatatttcaagca
gagccaagtattaaaagacattatttacgaaagtggttgaaaaggcaggatttaaatgat
tttgacattcgggagatattggactggcagtattacattgaaagattaggtggaactata
cagaaaattattaccataccagccgcgttacagtcagtacccaatcctgtacccagaata
cctcatcctgattggttgagaaagaaattgcttgaaagaaatgatgtatttaaacagaag
aagatcagtgaaatgttttctgtgtctgctagacctgtacaagacctggtatattcccaa
ggtgcgattccatcatctcagaatggtgtcaaggacatagaagatatcggcaataaaggg
cacaatggaaataaaaacggaatggctatatctcacaaacggaaacgtatccagtctggc
aatgatagtatggatttaacagatagtacccagaacactcagcaatcacagaactggcga
gaagctctcggtccaccaccccccatgggcaaaacaaaggaagaacgtaaaatttgggtt
gaatatcataaaaaaaaatgggaacttcaagctaaagaaaaacaagatagaaaacgacag
aggacagagttagatatttctacgtcaatgtccaccacaccagctagaggcctgggagga
tttttacgaaagacagctagaagtatgatggacatgccttggcaaattgtacagttagca
gagacttccaatcccggtcagtttaaactatgggctctgataggatcagatttacacgcc
atgaaactggttgtacctagaatattttacgtcaatcaaaaaacaccgaaacaaggagag
ggggaactctggaagaagagtataaagacgttacccagatctcatccagtctttaatcta
tatcagtattctgttcctgaagatgtttatttacaacatatcaatgatataaatgctgat
ctctcatcacctgatatagaaggtgtttatgaaacacaggtaccattagagttccgtgcc
ttgatacagctaggatgtgttgtcacggtaaatagagagttcgcgaggcagatgtcagga
agggagacagatacatttgaaatggataatttagattttagaacattagctcagtttcca
tatcttgaaactggttctattaaacatctgtatttctaccatcatgcttgtggaactaaa
cagttatatggattgtttttaccgatgtctaagaaaggtacagtgtttgtagttgatact
gtacgaagtgatcagatgcctaatataacagctttatacaacgctgaaagaaataacaaa
gtaactaagggagcagatgaagacagtctcccaccagcaggacatacttttgagtataaa
ctagagaaagatatcagacaagtttatcgaaccatacagagaatgttatcagcttataaa
gatgagaaacgtggtccaacatttatagctgtacaatcatcattagattttgctcatctt
gtatctgtaataccaggactaactgattttcctctagtaccaatacatatagctgatagt
gataatttatataatgtattagattggcagagagtcggatgtagaagattatttcaacat
tatttaaacgtagatattatacttcaggcaatgatggaacaatgccgctacctacatata
ccaattggtaatatgccaaaagacattaccttatatgggtgtgatctattctttgctcga
catctgtataaacacaatcatttattatggtgttcgccgactgagagacctgatttaggt
gggaaagaagcagacgacaatagattatgtatggagttacaaggtagtacaccaatagaa
ttaaacaatccaggacattaccctacagtttgtgtagagttagatattactagtttagct
gttaataccattattgagtcaggtcatgtgaatgatcaggaaggtgccagtgccgcgata
agtttcgatactatgccacaatcatcgttggaggacatggtacaagggcaaggtgctgcc
accatgttgacgagttatgatgaaacggctctatgttctacgacgtttagaatattaaaa
actatggttcatggttgggtccgtgacgttactacatactctaacgtcttcgctgataat
caaattatacatttctacagatggttaagatcgccatcttctctactatatgacccagct
ttacgtagaactttacataatatgatgaaaaaagtctttatgcagttaatagctgaattt
aaaaggctaggatctgagattgtgtatggtaattttaacagacttatattatgtacgaag
aaacgacaactcgtagacgccctgtcgtacgtagagtatatcactaacagtattaaatca
cgagaactcttccatcttattgatatgtcttatgaacagtgctgggaacttctcatgtgg
cttgatcaggctaattatgggggtgttcgagggaaactcactcagaataacaataataat
aataataatgatgataagaaagatgatggtgacagtgatggagaagaaatagtcgctgaa
caggaggaggaattgaataaatcagattccgaggatgagcctgaagtggaaatgaactgg
aatatgatgttatttttaccagaatcaggagcttgtcaaacaaatttcaatatgttgata
gcagggtatatattatctgtatataatcagatgttagaagaacaacgcagatttacacca
ggcaatactccgctacataatagatttgattctagtcaaacaccagttgtcatagatacg
tctgctacaccttcaacaatcaccttctctcaaaacttagtccagggagaactcgctcaa
caaatgttcgcattaactcaaaaagttcagaagaaattatcgggtaatcgtagtaaccat
ggtgatattgaaaagtttcctcaactaccaggctcccatctaccattaaataatccggct
ttagaattcgtcaagtgtgtttgtaaggttttatcattagatagtaacgtaactatacaa
gttaataaattaaagagagatttattaaagttgatttgtgttggagagttttcatctgaa
tctcagtaccaagatccttgtttatcttacattttaccagaggtgatttgtaaatcatgt
aatcacgttcgtgacctagacctatgtcgtgatccgtatctatgtcaagattcaccagga
tcatcatgggcgtgtatacagtgccacctggagtatgatattagtgaaatagaacagagt
ctattagaagctataaatagaaaatctatgtcctatattttacaggatttaaaatgttcc
aaatgtaaagggattaaagataataacatgaagaaatattgttcttgtgctggagaattc
agtaatactttagatattgaagagtatcgtaaacaattacgaacttttagaggtatagca
agacactataaaatggtgttattactagagacagtggaatggataatgaagatgaatcct
ggattataa

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