Lottia gigantea (owl limpet): LOTGIDRAFT_218281
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Entry
LOTGIDRAFT_218281 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_218281
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LOTGIDRAFT_218281
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LOTGIDRAFT_218281
Prokaryotic type
LOTGIDRAFT_218281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
20246773
NCBI-ProteinID:
XP_009059250
JGI:
218281
UniProt:
V4A0I3
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MDITFLGTASAYPTPTRGVSCTVFRTDSVCWLFDCGEGSQTQLMRSQLKASKIYKIFISH
LHGDHVFGLPGLLCTISQNKRRNKPVDIYGPVGLRKLLRINLQLSRTQLEFDYTVHELQT
LDHEYPADWQSWPVNHISDEDLHPNETPGTTIVPDSNNILHLFEDDEFIVTSVWTKHRIP
SYGFIIEEKSRPGTLDVSILVSKGVPIGPLYGKIKSGETITLENGTVIKPEDVVGPPIKG
RKVIIMGDSTDSWNLKHIGQDADVLIHEATLENSLSEKCIENGHSTPEMVAKLAKSLNVK
QLILTHFSQRYKPLSCQLKEGDDSVQTLLNEAEAILGTGSVICAEDFMVYNVARNK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatatcacatttctaggaacagcatctgcctatcctacacctactaggggtgtatca
tgtacagtatttagaactgatagtgtatgttggttgtttgattgtggtgaaggctcacag
actcagttaatgagaagtcagttgaaagccagtaaaatatataaaatattcatatcacat
ttacatggagaccatgtatttggtttaccaggattactatgtaccatcagtcagaataaa
cgcagaaataaaccagttgatatatatggtccagttggtttacgtaagttattaagaata
aatcttcagctctctcgaactcaactggaatttgattatacagttcatgaactacagacg
ctagatcatgaatacccagcagattggcagtcatggcctgtaaatcatattagtgatgaa
gacttacatcctaatgaaacacctggtacaactatagtacctgatagtaataatatatta
catctatttgaagatgatgagttcatcgtgacatctgtatggacaaaacacagaatacca
tcatatggatttataattgaagaaaagtctcggccaggcacactagatgtatcaatattg
gtatctaagggtgttcctattgggccattatatggtaaaataaagtcaggagaaacaata
acattagagaatggaactgtgataaaaccagaagatgttgttggtccaccaattaaaggt
agaaaggttattattatgggagacagcacagattcctggaatctcaaacatattggacaa
gatgctgacgtgttgatacatgaagcaactctagaaaattcattgagtgaaaagtgtata
gaaaatggacattctacaccggaaatggtggcaaagttagcaaaatccttgaatgtgaaa
caactaatattaacacattttagtcagagatataaacctctttcatgtcagttaaaagag
ggtgatgattcagtacagacattactaaatgaagcagaggctatattaggtacaggatct
gttatatgtgctgaagattttatggtatataatgtagccagaaataagtag
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