Lottia gigantea (owl limpet): LOTGIDRAFT_220490
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Entry
LOTGIDRAFT_220490 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_220490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_220490
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LOTGIDRAFT_220490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
PAP-OAS1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
20246931
NCBI-ProteinID:
XP_009062671
JGI:
220490
UniProt:
V3Z767
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MGIKRQHTEVEHGEDDDNEIEEDEDILANLSAAHQREVTGEPAKKLTKKEREKLYKEPTV
EELKQMKETENLFHSNLFRLQISEVLKEVTLKDKHKKYAHNLIDNLKEMILDIPASEQIR
LTDTQWFLKQKVKVPIYQPDDDNKGQFQYLPPSSICVVGSYSTNTVVKPHSVIDLLVEMP
KGCISEKDNFNHRLFRKRALYLTYVAAKLNKTTLCQAMKFTYQHGNHLKPILNLNVQGRS
INVNIIVCLPHNTYKLETFNVNICNINVKWYKEITQAESKDDVRLKPTPYSNMAILEDLT
QKTNTEYIENILADLPAFQDGIKLLKIWLRQRELDMGYGYFSSYIMTMYVMYLLSQRLLN
KMMSSYQVFRSTLIYLARNDWCVKAPSLFKIKKSLNEKSSEFNMKSVFDVVFLDVTGHYN
LAYTLNKAVYQRVLHEAKLSADYFTTKPNDAFDLLLMTSVAFDRKFDYCFHVDNLKSIQE
HGDTLGGLDKLIDNGGNYVYAYLTSILDVLEKALDKRILLIQPRSLPTPTWNIDEDCSNY
NDINCITIGLLVDTFMSTKSVEKGPTADSSEAREFREFWGEVSELRRFQDGSICEAIVWS
KGSTFRKKRLVISKIIPYVLKKYAGIDLEDIRYMGEEFDVPLHIPFPKQIDQPIYGTGEE
QHMSVIHTFDGIKKSLRGLSDMPLRINNIQGIHPVFRFTDVFPVMALNQFKETKKVNDHY
YPTRSLVAPAYQPTLPVTCILEGSGKWPDDIEAVKRLKAAIYIKISKDLSLDKSLKVILQ
PTHIDIFKNGFVFRIKIYALRELSIMKAFVTKTGVLSVQNNQKSFQFEKDVIALPKLSST
IHGIYQQHNTMCSAVRLAKRWTSAQLLSNHVPDIVIELIVCYIYLSPAPYTKPGSPGSAF
LRFLQLLSSFDWRNYPLMVDLNTEFTAEDLVDIPARFNKEREKFPLMFISTPMDKWSSYW
TKDQPSAMILNRLALLAKESLHVLQTQVLQPQSNDDIKEVFRPPLDSYDVVIYLQANQVP
RYYQSIDYPKDKPIPTLRSTDDQIFPVIDFDPVVKYVKELEEIYADRALFFYDQYGGTCI
GVLWKPRLFQKRDFKVPNLLMSKPSTRGSEIVLEFNLQAVLEDFKVLGTNLVDKVEVKTQ
PKTDV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaaacgtcaacacacagaggttgaacatggtgaagacgatgataatgaaata
gaagaagatgaagacattttagctaatttatctgctgctcatcaaagggaagtaactggt
gaaccagctaagaaattgactaaaaaagaaagagagaaattgtataaagaacctacagtt
gaggaacttaaacagatgaaagaaacagaaaatctctttcattccaacctattcagactt
cagataagtgaagtattaaaagaagttacattgaaagataaacacaagaagtatgcacat
aacctgatagataatttaaaagaaatgatattggatattccagcaagtgaacagattagg
ttaacggatacacaatggtttttaaagcagaaagtgaaagtacctatatatcaaccagat
gatgataataaaggccagtttcagtatttacctcctagttctatatgtgttgttggtagt
tattctactaatacagtagttaaaccacattctgtcatcgatttacttgtagaaatgcca
aagggctgtatatcagaaaaagataattttaaccatcgtttattcagaaaaagagcatta
tacttgacttatgtagctgctaaattaaataagactacactctgtcaggcaatgaaattt
acctatcaacatggtaaccatttaaaacctatcttaaatctaaacgtgcaaggtagaagt
atcaatgttaatataattgtatgtttacctcataatacatataaactagagactttcaat
gttaatatatgtaatatcaatgtaaaatggtataaagaaataacacaggctgaatctaaa
gatgatgtaaggttaaaaccaactccctatagcaacatggctatattagaagatttaaca
cagaaaacaaatactgaatacatagaaaatattctagctgatttaccggcttttcaagat
ggtattaaattattaaaaatatggctgagacaaagagagttagacatgggatatggttat
ttttctagttatattatgactatgtatgtaatgtatttgttatcgcaaagactactcaat
aaaatgatgagcagttatcaagtgtttcgaagtactctaatttatttagctcggaatgat
tggtgtgtcaaagcaccgtctttgtttaaaataaagaagagtttaaatgagaaatcatca
gagttcaatatgaaatctgtatttgatgtggtatttttagatgttactggtcactataat
ttagcctatactttgaataaagctgtttatcaaagggttctacatgaagcaaagttatca
gctgattattttactactaaaccaaatgatgcatttgatctcttacttatgacatctgta
gcttttgatagaaagtttgactattgttttcatgtagataatctgaagtcaatacaagaa
catggagatacattaggaggtctagacaaactgattgataatggtggaaactatgtatat
gcctatttaacatcaatattggatgttcttgaaaaggctctagataaacgaatattattg
atccaaccaagatcattaccaacaccaacatggaatattgatgaagattgtagtaattat
aatgatataaactgtataactataggattattagttgatacctttatgtctactaaatca
gtagaaaaaggtccaacagctgattcctctgaggctcgtgaatttcgagagttttggggt
gaagtttctgagttaagaagatttcaagatggaagtatctgtgaggctattgtttggtct
aaaggttctacatttagaaagaaaaggcttgtaatatcaaagataattccctatgttctt
aagaagtatgctggtattgatttagaagatataaggtatatgggtgaagaatttgatgtt
cctcttcacataccatttcctaaacaaatagaccaacctatatatggtacaggagaagaa
caacatatgtctgttatacatacatttgatggtataaagaaatcattacgaggtttatca
gatatgcctttaagaatcaacaatatccaaggaattcatcctgtttttagatttactgat
gtattccctgttatggctttaaatcagtttaaagagacaaagaaagtaaatgatcattat
tatccaacaagaagtttagtagcaccagcttatcaacctacccttccagtaacatgtata
ttagaaggaagtgggaaatggcctgatgatatagaagcagtcaagagattaaaagcagcc
atttatattaagatttctaaagatttgagtttagataaaagtttaaaagttattttacag
ccaactcatatagacatctttaagaatggttttgtatttagaataaagatttatgcatta
agagaattgagtattatgaaagccttcgtaactaaaacaggagtattatctgtacagaat
aaccagaaatcatttcagtttgaaaaagatgttattgcattacccaaacttagcagtact
atacatggcatatatcaacaacataatacaatgtgttctgcagtacgattggctaaaaga
tggacatctgctcagttattatccaatcacgtaccagatattgttatagaattaattgtt
tgttatatatatttatcacctgcaccatataccaaacctggttcacctgggtcagcattt
ttaagatttctacaattattatccagttttgattggagaaattatccattaatggttgat
ctgaacacagaatttacagctgaagatttggtagatatacctgctaggtttaacaaagaa
agagagaaatttcctttaatgtttatttctacaccaatggataaatggagttcatattgg
actaaagaccaaccatcagctatgatattaaatagattggcattgttagctaaggaatct
cttcatgtcttacaaacacaagttttacaaccacaatctaatgatgatattaaggaagta
tttcgcccaccattagatagctatgatgttgtgatatatttacaagctaatcaagtacca
agatattatcaatcaatagattaccctaaagataaacctatacctactctcagatctact
gatgatcagatatttcctgtaatagattttgatcctgttgtaaagtatgttaaggaatta
gaggaaatatatgctgatagagcactatttttctatgatcagtatggtggaacttgtatt
ggtgttttgtggaaacctaggttatttcaaaagagggactttaaggtgccaaatttacta
atgagtaaaccatctacaagaggaagtgagattgtattagagtttaatctacaagctgtt
ttagaagattttaaagtattaggaactaatctagttgataaagtagaagttaaaacacaa
cctaagactgatgtgtaa
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