Lottia gigantea (owl limpet): LOTGIDRAFT_221850
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Entry
LOTGIDRAFT_221850 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_221850
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_221850
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_221850
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LOTGIDRAFT_221850
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LOTGIDRAFT_221850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
20247021
NCBI-ProteinID:
XP_009064553
JGI:
221850
UniProt:
V3ZKE7
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MKLQESSVDPATKKMKIEKKKKIKNEVEEVEEEETPVKIKKKKEKKSKDTEEPGKKLKKE
KKVKIEEAETPSNVERKDKKEKKSKVNGAKAETNGLKSETNGEIISNGKQEEELSPQQKA
GAFSNFRISPNTVKKLQKNGITYLFPVQSETFDIVYSGSDIITQARTGTGKTLAFSLPII
EKLQLDKSPPQRGRPPKVLVMAPTRELAKQVCEDFESYSSSLVVLCIYGGTPYGPQERVL
RSGVDVIVGTPGRINDHIEKGNINLSQIKHVILDEVDNMLDMGFVEIVEQILAYAYKVHA
IISERDEKPQTMLFTATLPPWVRKTANKYMREDVKTIDLIGKDFNKTSKTHLAIKCNHSE
RASILGDIVSVYSGNHGRAMIFCQTKKEADELAISPCIKVEGHVLHGDIAQEKRESVLKG
FREGKYKVLITTDVAARGLDIPEVDIVIQCEPSKYADAYIHRSGRTGRAGRSGVCVCLYS
AREEHSLRALEYKAGIKFKRTGPPTPEDIIKAASDDAYRALDDVPKETIQHFMEKAESLI
EEKGACEALAAALAVISNNTSIERRSLLTAKKGYTTYICRTTVELFGPGYIWRFLEDNFP
EVKDKAQSMTLLKDKMGCAFDIPTEFESTIGDEYEGRNGIVISKASEMPALIQTQNRPIG
RSSWGGGGGGGSYRGRNGFNNYSNNRHNFRGSSGSSSGFGYKRKPMFSDHGGSKRTKFG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacaagaatcatccgtggatccagcgacaaagaaaatgaagattgaaaagaag
aaaaagatcaagaatgaagttgaagaagttgaagaagaagaaactccagtcaaaataaaa
aagaaaaaagaaaagaaatctaaagacactgaggagccagggaagaaattgaaaaaagag
aaaaaagtaaagatagaagaagctgaaacaccaagtaatgttgagagaaaagataaaaag
gagaaaaaatctaaagtaaatggagctaaagctgaaacaaatggtttaaaatcagaaaca
aatggagagatcatttccaatgggaaacaagaggaagaattgtcaccacaacaaaaggct
ggggcattttcaaacttcagaattagcccaaacactgtcaaaaaactacaaaaaaatggg
attacatatttatttccagttcaatcagaaacctttgatattgtttatagtggatctgat
attatcacacaagccagaactggaacaggaaaaactttggccttttcactgcctataatt
gagaaattacagttagataaatcaccaccacaaagaggacggcctccaaaggtactggtc
atggcaccaacaagagaattagctaaacaagtctgtgaagattttgaatcctactcatca
tcactagttgtactgtgtatttatggtggaacaccctatggtcctcaagagcgagtatta
agatctggtgtagatgttatagttggtacaccaggacgtatcaatgatcatatagagaaa
ggcaatattaatctttcacagattaaacatgttatactagatgaggttgacaatatgtta
gatatgggttttgtggagattgtggaacagattctagcttatgcttacaaagttcatgct
ataatttcagagagagatgagaaacctcaaactatgttatttactgctactctaccacca
tgggtcagaaaaacagctaataaatatatgagagaagatgtcaaaactatagatttaatt
ggcaaagattttaataaaacttctaaaacacatttagctatcaaatgtaatcacagtgag
agggcatctatattaggtgatattgtatctgtatatagtggtaatcatggacgagcaatg
attttctgtcaaactaaaaaggaagccgatgaacttgctataagtccttgtataaaagta
gaaggtcatgtgttacacggtgatattgcccaagagaaaagagaatctgtgttaaaggga
tttagagaaggtaaatataaagtgttaataacaactgatgttgctgctagaggattagat
atacctgaagtggatatagttatacaatgtgaaccttcaaagtatgctgatgcttacatt
catagatctggtagaacaggtcgagcaggtagatcaggtgtatgtgtatgtttatatagt
gccagagaagaacattcattacgagccctagaatataaagctggtataaaattcaaaaga
acaggaccacctacaccagaagacattataaaagcagcatctgatgatgcatacagagca
ttagatgatgtacctaaagaaacaattcaacattttatggaaaaagcagaaagcttgatt
gaagaaaagggtgcttgtgaagcattagctgcagccctagcagtcatttctaataataca
tctatagaaagaagatcactattaacagcaaagaagggctatacaacttatatttgtcga
accacagtggaattatttgggccaggctatatctggagatttttagaagataattttcca
gaagtgaaagataaagctcaatcaatgacattgttaaaagataaaatgggctgtgcattt
gatatcccaacagaatttgaatcaacaataggtgatgaatatgagggacgtaatggtata
gtaatatctaaagctagtgaaatgccagctttaatacaaacacaaaatagaccaattgga
cgatctagttggggtggaggaggaggaggagggagttatcgtggtaggaatggttttaac
aactattctaataatagacataatttccgtggaagtagtggtagcagcagtggatttgga
tacaaaagaaaaccaatgttttctgatcatggcggttccaaaaggactaaatttggttaa
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