Lottia gigantea (owl limpet): LOTGIDRAFT_222708
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Entry
LOTGIDRAFT_222708 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_222708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_222708
Spliceosome [BR:
lgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LOTGIDRAFT_222708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Symplekin_C
DUF5301
Motif
Other DBs
NCBI-GeneID:
20247071
NCBI-ProteinID:
XP_009065897
JGI:
222708
UniProt:
V3YZ87
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSLADELLADLEEGGPDYNEEDDIIPEVEDIQEVAMETEKPAYDVHSIAKLQSSQELKDI
ITNIEKYSKMTRSEAISGPVESDPEYKLIVDANNMTVEIDNEINVIHKFVRDTYSKRFPE
LESLVPTALEYISTVKELGNNIMEKSKNNEALQEILTPATIMVVSVTASTTQGSRLPESE
LKTIIEACDMAVELTQCKHNIFEYVESKMTFIAPNVSIIVGASIAAKLMGVAGGLTKLSI
MPACNIMVLGSQKRTLSGFSSTAILPHTGFLYYTDIVQKTPPDLRKKATRLVAAKCTLAA
RVDSFHESTDGSVGDNLRAEIEQKLDKLQEPPPVKTIKALPAPIEQSKKKRGGRRARRMK
DRLGLTEMRKATNRMNFGDIEDDAYQEDLGFSLGSLGKSNSGKIRGPPVDAKTKARISKT
LQQKLSKGNQSTWGGSTTVKKQVAGTASSVAFTPLQGLEIVNPQAAEKRIHEANQKYFSN
TAKFLKVETPKPS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagcagatgaattgttggctgatttagaggaaggggggcctgattacaatgaa
gaagatgatattatccctgaagtggaagacattcaggaggttgccatggaaacagaaaag
ccagcctatgatgtccacagcattgctaaactacagagtagtcaagagcttaaggatatt
ataactaatattgaaaagtattctaaaatgacaagaagtgaagcaattagtggtcctgta
gaatctgatccagaatataaactgattgttgatgctaacaatatgacagttgaaatagac
aatgaaattaatgtaatacacaaatttgtcagagatacctattctaaaagatttccagaa
ttagagtcattagtacctacagctttagaatatatttctacagttaaggagctgggtaat
aacattatggagaaatctaagaataatgaagcattacaagaaatattaacaccagctact
attatggttgtcagtgttacagcctctactacacaaggatctagattgccagagtctgaa
ttaaagactattatagaagcttgtgatatggcagtagagttaacccaatgtaaacataat
atatttgaatatgtagaatctaaaatgacatttatagcacctaatgtatctataatagta
ggagcttctattgctgctaaattgatgggtgtagctggagggttaaccaaattatcaata
atgccagcatgtaatatcatggtattgggttcacagaaacgaacattgtctggtttctct
tctacagctatattacctcatactggtttcttatattatactgatatagtccagaaaaca
ccaccagatttaagaaagaaagctacaagactggtagcagctaaatgtactcttgcagcc
agagttgacagtttccacgagagtacagatggatctgtaggggataatcttagagcagaa
atagaacagaaactagataaactacaagaacctccaccagttaaaactattaaagcctta
ccagcccctattgaacaatccaagaagaaacgaggtggacgaagagcaagaagaatgaaa
gatagactaggtttaactgaaatgagaaaagccaccaacagaatgaactttggtgatatt
gaggatgatgcttatcaagaggatttaggtttttcacttggttcactaggtaaatctaat
tctggtaaaattagaggaccaccagttgatgctaaaactaaggctagaatctccaagaca
ttacagcaaaaattaagtaaaggtaaccaatcaacatggggtggtagtactacagttaaa
aaacaagttgctggtacagcttctagtgtagccttcacgccattacagggtcttgaaatt
gtgaatccacaagctgcagaaaagagaattcatgaagctaatcagaaatatttctccaac
acagccaaatttctgaaagttgaaacacctaagcccagttaa
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