Lottia gigantea (owl limpet): LOTGIDRAFT_223290
Help
Entry
LOTGIDRAFT_223290 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
LOTGIDRAFT_223290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_223290
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_223290
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LOTGIDRAFT_223290
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
LOTGIDRAFT_223290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
WD40_RFWD3
MIOS_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
20247111
NCBI-ProteinID:
XP_009066885
JGI:
223290
UniProt:
V3YWI9
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MMNTIPHSNHANAPPGKRKEIYKYEAPWTVYSMNWSVRPDKRFRLALGSFVEEYNNKVQI
VALDEETSDFVAKSTFDHPYPTTKIMWIPDSKGVFPDLLATSGDYLRVWRVGETDSPGTR
LECLLNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVIGRVNMDPRVN
MVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ
HIPLLRLAWNKQDPNYLCTMAMEAQECIILDVRVPCTPVARLNNHRACINAITWAPHSSC
HICTAADDHQALIWDIQQMPRAIEDPILAYTAAGEINQIQWSSTQPDWISICYNNNMEIL
RV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatactataccccactcgaatcacgcgaatgcaccaccaggaaagcggaaagag
atatataaatatgaagctccatggactgtgtatagtatgaactggagtgtcagacctgat
aaacgatttcgattggctctcggtagttttgttgaagaatacaataacaaagttcagata
gtggcattagatgaagaaacctcagattttgttgccaaaagtacatttgatcatccttac
cctactacaaaaataatgtggattccagattcaaaaggtgtatttcctgatttattagct
actagtggagattatctcagagtatggcgagtgggagaaacagattcacctggtactaga
ctagaatgtcttctcaataataataaaaattctgatttttgtgccccactgacatcattt
gattggaatgaagtggaccctaatttattaggtacctcaagtatagatacaacttgtact
atctggggtttggagacaggacaagttatagggcgtgtcaatatggacccccgagtcaat
atggtgtctggtcatgttaaaacacagttaatagcccatgataaagaagtttatgatatt
gcttttagtcgagctggtggtggacgtgatatgtttgctagtgttggtgccgatggatca
gtaagaatgtttgatttaaggcatttagaacattctactataatctatgaggatccccaa
catatcccactccttcgcctagcatggaataaacaagaccctaactatctctgtacaatg
gctatggaggcacaagagtgtataatattagatgttagagtaccatgtacaccagtagcc
agattaaacaatcatagagcctgtattaacgctatcacctgggctcctcattcatcttgt
catatctgtactgcagctgatgatcaccaagcattgatctgggatatacaacagatgcca
cgagctatagaagatcctatattagcttacacagcagctggtgaaatcaaccagatacaa
tggtcctctacccaaccagactggatctctatctgttataataataacatggaaatatta
cgtgtgtag
DBGET
integrated database retrieval system