KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_223290
Entry
LOTGIDRAFT_223290 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    LOTGIDRAFT_223290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_223290
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_223290
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     LOTGIDRAFT_223290
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     LOTGIDRAFT_223290
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_Aladin WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd EIF3I WD40_RFWD3 MIOS_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 20247111
NCBI-ProteinID: XP_009066885
JGI: 223290
UniProt: V3YWI9
LinkDB
Position
Unknown
AA seq 362 aa
MMNTIPHSNHANAPPGKRKEIYKYEAPWTVYSMNWSVRPDKRFRLALGSFVEEYNNKVQI
VALDEETSDFVAKSTFDHPYPTTKIMWIPDSKGVFPDLLATSGDYLRVWRVGETDSPGTR
LECLLNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVIGRVNMDPRVN
MVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ
HIPLLRLAWNKQDPNYLCTMAMEAQECIILDVRVPCTPVARLNNHRACINAITWAPHSSC
HICTAADDHQALIWDIQQMPRAIEDPILAYTAAGEINQIQWSSTQPDWISICYNNNMEIL
RV
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgatgaatactataccccactcgaatcacgcgaatgcaccaccaggaaagcggaaagag
atatataaatatgaagctccatggactgtgtatagtatgaactggagtgtcagacctgat
aaacgatttcgattggctctcggtagttttgttgaagaatacaataacaaagttcagata
gtggcattagatgaagaaacctcagattttgttgccaaaagtacatttgatcatccttac
cctactacaaaaataatgtggattccagattcaaaaggtgtatttcctgatttattagct
actagtggagattatctcagagtatggcgagtgggagaaacagattcacctggtactaga
ctagaatgtcttctcaataataataaaaattctgatttttgtgccccactgacatcattt
gattggaatgaagtggaccctaatttattaggtacctcaagtatagatacaacttgtact
atctggggtttggagacaggacaagttatagggcgtgtcaatatggacccccgagtcaat
atggtgtctggtcatgttaaaacacagttaatagcccatgataaagaagtttatgatatt
gcttttagtcgagctggtggtggacgtgatatgtttgctagtgttggtgccgatggatca
gtaagaatgtttgatttaaggcatttagaacattctactataatctatgaggatccccaa
catatcccactccttcgcctagcatggaataaacaagaccctaactatctctgtacaatg
gctatggaggcacaagagtgtataatattagatgttagagtaccatgtacaccagtagcc
agattaaacaatcatagagcctgtattaacgctatcacctgggctcctcattcatcttgt
catatctgtactgcagctgatgatcaccaagcattgatctgggatatacaacagatgcca
cgagctatagaagatcctatattagcttacacagcagctggtgaaatcaaccagatacaa
tggtcctctacccaaccagactggatctctatctgttataataataacatggaaatatta
cgtgtgtag

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