Lottia gigantea (owl limpet): LOTGIDRAFT_223779
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Entry
LOTGIDRAFT_223779 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_223779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_223779
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LOTGIDRAFT_223779
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
HECT type E3
LOTGIDRAFT_223779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
20247154
NCBI-ProteinID:
XP_009044689
JGI:
223779
UniProt:
V4BAU1
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MAKILCWGKADSGQLGIGGSDENQCLPIPVTSLPESTIVDISCSDLHTLVAVENGQLYSC
GNNDFGQLGHSGQFSRLEHVEKIKSQKVIKVAVGQSHSLVLTAANEVFTWGNNKHGQLGR
DGINEEVTKIPKLVKTLAVYSVIQISCGSNHCLVLTSEGLVASWGANNFGQLGCNQTISH
RSQPEFINCLKGIPIAQITTGGNHSFVLSKSGAVFGWGRNSFGQLGVNDERDRPFPTLCK
SLRYQRIKYLACGEDHTAALTQNGGVFTFGAGSYGQLGHSSVQNEVLPRQVTELMGSDVT
QIACGRRHTLAYVTASGRLYAFGLGGTGQLGNGTTSNKTSPCRVSGPFLPPIKNNSMSVD
VVDKDSVIIKTIVAGGDSSFIISLDTKVNKQPDDFRIHSSSNQILSLTPSVIQTICQLQS
ADSPSVELSEEVIKIFSNASCLNCSFLLSDDKHYGSNSKNHGLDLDKAKESFTRLSEATN
VYMIQKICNSLEEMIRCLPSSPPDIEALRLYLLLPLCHVFDEPKYYGDLIVPFGHSIISL
DKAASKVIDIWWSSFTPASFNRIVYVKWTNYTLSSVLHFYNVGYFRLMNRMDKLYLITSF
TFLYNVNEQNGQIIPYHQFYISILKNKVNVKVDYVSWVQRSYHKSQELHYCNYPFLFDAA
AKSMLLHTDAMMQMQSAIDEVTRFNFNTLLNRMPIDPINPCLVLYVTRENIVHETLQQLS
KHTSADLKKPLKVVFIGEEAVDEGGVRKEFFMLLLREVMDTKYGMFKFYEESGLKWFSPQ
TFEENDMFHLIGILCGLAIYNFTIINLPFPLALYKKLLKRPVTIEDLNELSPLVARNLQS
ILDFDGNVEETFGLTFEVSQELFGESSSVELCPGGSKKMVNKENRKEYVDTYIDYVFNTS
VENQYGAFSSGFLKVCGSRVLELFHPLELQAMVIGNENYDFGELEKNTEYKNEYHRYHPT
IQYFWEVFYDLSLEDKKKFLKFLTGSDRISIFGMESIKMVIQSTNGGDTYLPVAHTCFNL
LDLPKYTSKQKLEEKLILAIQHTEGFGIV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattttatgttggggtaaagcagatagtggtcagctgggcattggaggaagt
gatgagaaccaatgtttacctataccagttacatcactacctgaatctacaattgttgac
atatcttgtagtgatctacataccttagtggcagttgaaaatggtcaactatatagttgt
ggtaataatgattttggacaacttggacacagtggtcagttttcacgactagaacatgtg
gagaaaataaaatctcagaaagttattaaagtagcagtaggccagtctcacagtttagtt
ttaactgctgctaatgaagtgtttacgtggggtaacaataaacatggtcaattaggtaga
gatggaataaatgaagaagtcacaaaaataccaaaattagtgaagacattagcagtttat
tctgtaatacagatatcttgtggctcaaatcattgtctagtattaacctcagagggacta
gttgcaagttggggtgcgaataattttggtcaattaggatgtaatcagacaataagtcat
cgctcacagccagaatttatcaattgtttaaaaggtatacctatagcacaaataacaact
ggaggaaatcatagctttgttttatcaaaatcaggggcagtctttggttggggcagaaat
agttttggtcaattaggtgtaaatgatgaaagagaccgtccatttcctacactttgtaag
tcattacgatatcagagaatcaagtatttagcttgtggtgaagatcatactgcagcctta
acacagaatggtggtgtgtttacatttggtgctggtagttatggtcaactaggtcacagt
agtgtacagaatgaagtattacctagacaagtaacagaattaatgggtagtgatgtcaca
caaatagcctgtggcaggcgtcataccttagcctatgtaactgccagtggacgtttatac
gcttttggcttaggtggtacaggccagcttggtaacggcaccaccagtaataagacatct
ccatgtcgtgtatcgggaccgttcctaccaccaataaagaataacagtatgtcagtagat
gtagtggacaaagattctgtgataattaaaactatagtagctggtggtgattcttctttc
attatatctctagatacgaaggttaacaaacaaccagatgattttcgtatccattcctct
agtaatcagatattatctctaacaccatcagttatacagaccatctgtcaattgcaatca
gctgattccccttcagtagaattatcagaagaagttataaagatcttttctaatgcatcg
tgtctaaattgctcatttctactcagtgatgataaacattatggtagcaatagtaaaaat
catggtttagatttagataaagccaaagagagttttacaagattgtctgaagctaccaat
gtgtatatgattcaaaagatatgtaatagtttagaagaaatgataagatgtttaccaagt
tcacctccagatatagaagccttacgtttatatttattattaccattgtgccatgttttt
gatgaacccaagtattatggtgatctaattgtaccatttggtcattctattattagttta
gataaagcagcatcaaaagttatagatatatggtggtcatcatttactcctgcatctttt
aacagaattgtatatgtaaaatggacaaattataccttatcatcagttttacatttctat
aatgttggttatttcaggttaatgaacagaatggacaaattataccttatcaccagtttt
acatttctatataatgttaatgaacagaatggtcaaatcataccttatcatcagttctac
atttctatattaaaaaataaagtaaatgtgaaagtggactatgttagctgggttcaacgc
tcatatcataaatctcaggaattacactactgtaattatccattcttatttgatgctgct
gctaagagtatgttgttacatactgatgcaatgatgcaaatgcagtctgcaatagatgaa
gttaccaggtttaattttaataccttattaaatcgtatgccaatagatcctatcaatcca
tgtcttgttttatatgttaccagagaaaatatagtccatgaaacattacagcaactcagc
aaacatactagtgctgatcttaaaaaaccactgaaggtagtttttataggtgaagaagct
gtagatgaggggggtgttcgcaaggaattttttatgttactattaagagaagtaatggat
actaaatatggaatgtttaagttttatgaagagtctggattaaaatggtttagtccacag
acatttgaagagaatgacatgtttcatctgattggtatattatgtggattagctatctat
aattttactatcatcaatctaccttttccactagccttgtataaaaaattacttaaaaga
cctgtaactatagaggatttaaatgaactctcaccactagtagctagaaacttacagagt
attttagattttgatggaaatgtagaggaaacttttggactaacatttgaggtatcacaa
gaattatttggagaatcttctagtgtagaactatgtcctggtggttctaaaaaaatggtg
aataaagaaaatagaaaggaatatgttgatacgtatattgactatgtgtttaatacctca
gttgaaaatcagtatggtgcatttagtagtggtttcttaaaagtgtgtgggagcagagtt
ttggaattattccatccactagaattacaggcaatggttataggtaatgagaactatgat
tttggtgaactagaaaagaatacagaatataaaaatgaatatcatcgctatcatcctaca
atacagtatttctgggaagtattttatgacttatcactagaagataagaagaaatttcta
aagtttttaacgggtagtgatagaatctctatttttggtatggaaagtataaaaatggta
atccagtcaactaatggaggtgatacatatctacctgtggctcatacatgttttaatcta
ctggacttacctaaatatacttcaaaacaaaaacttgaagagaaactcatactagcaata
caacatacagaaggttttggcattgtctga
DBGET
integrated database retrieval system
