Lottia gigantea (owl limpet): LOTGIDRAFT_223895
Help
Entry
LOTGIDRAFT_223895 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K07920
Ras-related protein Rab-33B
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
LOTGIDRAFT_223895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_223895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_223895
04031 GTP-binding proteins [BR:
lgi04031
]
LOTGIDRAFT_223895
Membrane trafficking [BR:
lgi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
LOTGIDRAFT_223895
Others
Specific organelles associated proteins
Auto phagosome
LOTGIDRAFT_223895
Exosome [BR:
lgi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
LOTGIDRAFT_223895
GTP-binding proteins [BR:
lgi04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
LOTGIDRAFT_223895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
SRPRB
G-alpha
ATP_bind_1
PduV-EutP
TniB
Septin
Motif
Other DBs
NCBI-GeneID:
20247165
NCBI-ProteinID:
XP_009044897
JGI:
223895
UniProt:
V4BAC5
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MASFQSFEPPPREVKPSSGAVKIVEKQAQRRIFKIIVIGDSNVGKTCLTYRFCSGKFPDK
TEATIGVDFREKSIDVDGEHIKLQLWDTAGQERFRKSMVQHYYRNVHAVVFVFDVTKMSS
FEDMPQWIEECDRHNLNKQLPRILVGNKCDVKDKIAVNTNLAQKFADSHNMPLFETSAKD
DEKANHVDAIFMTLAHKLKNAKPMMSPHLARFTPGERPEVINVRGSPHHRGLQTANPQSS
ENKDNCAC
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttcagtcgtttgagccgccaccaagggaggtgaaaccatcgtcgggagct
gtcaaaatagtggaaaagcaggcacaaagaagaatctttaaaatcatagtgattggcgat
tctaatgtgggcaaaacatgtttgacttatcgattttgtagtggtaaatttcctgacaaa
acagaagctaccattggtgttgattttagggagaaaagtattgatgttgacggggagcac
attaagctacaactgtgggatactgctggtcaagagagatttagaaaaagtatggtacag
cattattatagaaatgttcacgcagtggtttttgtatttgatgtaaccaaaatgagttcg
tttgaagatatgcctcagtggatagaagaatgtgatcggcataatttaaacaaacaactt
cctagaatattagttggtaacaagtgtgatgtgaaagacaaaatagcagtgaacacaaat
ttggcacaaaaatttgctgacagtcataacatgccattgtttgaaacttcagctaaggat
gacgaaaaggccaatcacgtggatgccattttcatgactttggcacacaaactgaaaaat
gcgaaacccatgatgtcaccacatttagccagattcacgccaggagagagaccagaagtg
ataaatgtaagaggaagtccacatcatcgtggtttgcagacggcgaatcctcaatcatca
gaaaacaaggataattgtgcctgctga
DBGET
integrated database retrieval system