Lottia gigantea (owl limpet): LOTGIDRAFT_224297
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Entry
LOTGIDRAFT_224297 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_224297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_224297
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LOTGIDRAFT_224297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
DYNC2H1_AAA_dom
Motif
Other DBs
NCBI-GeneID:
20247206
NCBI-ProteinID:
XP_009045723
JGI:
224297
UniProt:
V4CMP7
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MHPCSIFLFFYCRQIKDEEKVSVFESDNWKRVLILLEAIQEKKKIENAPKLVPLAIQLLT
RILESDDHINGEYIKQLVLSTLYFICSRHLEEIKSSGLKAEQFNLEMIVQCIRTSDNPQT
HHQALLVLTVAAKIQPGQLLHNVMSVFTFMGANTLRQDNTYSFHIISQILETVIPACEET
TKSPKSGKKEDEKKPEMIIGMILRIFVDAYPHIPEHRKLMLFSKLIQIVGPDKYLWHCLL
LFIEQVATKGRQTSIEDDDEDSKQAGPISTTDLDFILKLATSFPLVTQISSVKTMISFIA
SLPVEKDDVPLQPSINKAKYTTDVNIITDEAKIFNLATHTAKQLRHFKYATFYLLCQHLQ
CESFLAQMANHQEEELLPNFQKYLEKVLQYLSQAARNSELCQQKSDSKFHKVLLHKVYDL
LDKVVSLLPDVMFVQVVSGLMDHDLVPVQRKSMELLNTKLHQIKESQSSTQSEMLLPLVE
KLNIIAKLTLLVESEEEKTLNGQTALYSLKLLCRMLASKNPKPFVEVLKLSSEVLKKRRE
NPAICATVLLCIAELCTCLKVHVIQYLPLFIPQVIEMVAQDDSLLDNELLTLSFATALLC
VVQNLPQFLSPYLLDILHQVCRISYFADGDNPQRPQLKIRLQLVRHLLATSLPSRVILPC
IFNCYDLLVTTDWVRYIFVMSILKEHISEMKKEDLDSYQNQLLEFFYKAFDFRIKYSQVI
IKHFKSGIITIEDSVIPTMTSMVMKMSEASFRPMMFKVFDWCTRDNNKDRILVLYRLSDY
LVETLRSLFMIVAGPIVNYTAQILDLNNSSKTRKVNNNKQNVLITSILDCLSKCFLYDNE
GFLTSDRFETVMQPIVDQIDNLPYNKKESIYKNRVTNHLVPCIGNLVLAAHDDSLWKKLN
YQILLKTRHSDALVRMAALEIEDEFHKKLGLDFMTLLPETIPFLAELMEDDNEEVESKSH
RVIVEMEKTLGEPLQKYF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatgttcaatttttctgtttttttattgtagacaaattaaagatgaagaaaaa
gtatcagtatttgaaagtgataattggaagcgtgtattgatattattagaagctatacag
gagaagaagaaaattgaaaatgcaccaaaactggtgcctttagcaatacagttattaaca
agaattttagaaagtgatgatcatattaatggtgaatatattaaacagctagttttatct
acactatattttatatgttcaagacatttagaagaaataaaatcatcaggattaaaggct
gaacagtttaatttagagatgatagtacagtgtataaggacatctgataatcctcaaaca
catcatcaagctttactggttcttacagtagctgctaaaatacaacctggtcagttactg
cacaatgtgatgtctgtatttacctttatgggtgccaacactctacgtcaagataatacc
tatagttttcatataatatctcaaatattagaaacagttatacctgcatgtgaagaaact
accaaatcaccaaaatcaggaaagaaagaagatgaaaagaaaccagaaatgattatagga
atgatcttacgtatatttgttgatgcttatcctcatatcccagaacacaggaaactgatg
ttattctctaaactgatacagattgttggtcctgataaatatctctggcattgtctgtta
ttatttatagaacaagtggccaccaagggtcgtcaaacatcaatagaagatgatgatgag
gattctaagcaagctggtcccatttcaactacagatttagactttatattaaaattagct
acatccttccctcttgttacacaaatatcatcagttaaaactatgattagttttatagct
tctttacctgttgagaaagatgatgtacctttacaaccatctataaataaagctaaatat
acaactgatgttaatattattactgatgaagctaaaatatttaatctggctacacataca
gctaaacaactccggcattttaaatatgctaccttttatttactctgtcaacacttacaa
tgtgaatcattcttagctcagatggctaatcatcaagaagaagagttgctacctaatttt
cagaaatatttggagaaagttcttcaatatttatcacaagcagccagaaactcagagtta
tgtcaacagaaatcagatagcaaatttcataaagttttactacataaagtatatgattta
ttagataaggttgtgtctctacttcctgatgttatgtttgtacaagttgtgtcaggctta
atggaccatgatttagtaccagttcaaaggaaatctatggagttgttaaatactaaatta
catcaaataaaggaaagccaatccagcactcagtctgagatgttattaccactggtagag
aaattaaacatcatagcaaaactaactttattggtggagagcgaggaagaaaaaacattg
aatggtcaaacagctttatatagtttaaaactattgtgtagaatgttagctagtaaaaat
cctaaaccatttgttgaggtattaaaattgtcaagtgaagtattaaagaaaagaagagaa
aatccagctatatgtgctacagtattattatgtatagcagaactgtgtacatgtcttaaa
gtacatgttatacaatatcttccattgtttataccacaagttatagaaatggtagcccaa
gatgattcattattagataatgagttgttaacattaagttttgctacagctttattatgt
gttgttcagaatttaccccagtttttatcaccatatttactagatatacttcatcaggtt
tgtcgtatatcgtattttgctgatggtgataatccacaaagaccacaattaaagattaga
ttacagctagtcagacatctgttagctacatcattaccatctcgagttattctaccttgt
atctttaactgttatgatttattagttactacagattgggtaagatatatttttgtcatg
tctatattaaaagaacatatatcagagatgaagaaggaagatctagatagttatcaaaat
caactcttagaattcttttataaagcatttgatttccgtattaaatattctcaggtaatt
attaaacattttaaaagtggtattatcactatagaagattctgttattccaactatgact
agtatggtaatgaagatgtcagaggctagctttagacctatgatgtttaaggtatttgat
tggtgtacaagagataataataaagatagaatattggtactatatcgtcttagtgactat
ctggtggaaacattaagaagtttatttatgatagtagctggtcctatagttaattataca
gcacaaatattagatctgaacaattcatctaaaacaagaaaggttaataataataaacag
aatgtattaataacatctatattagattgtttatctaaatgttttctctatgataatgaa
ggatttttaacttctgatagatttgaaactgtcatgcaaccaatagtagatcaaattgat
aatttaccatacaataaaaaggaaagtatctataaaaacagagtaactaatcatttagta
ccttgtattggtaacttagtcctagcagcccatgatgattctttatggaaaaaactcaac
tatcaaatacttcttaaaactagacattctgatgcactggtaagaatggcagctttagaa
attgaagatgaattccataagaaattaggtctagatttcatgactttattaccagaaaca
attccttttctggctgaattaatggaagatgataatgaagaagtagagtctaaatcacat
cgtgttattgtggaaatggagaaaactttaggagaaccattacagaaatatttctaa
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