Lottia gigantea (owl limpet): LOTGIDRAFT_224905
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Entry
LOTGIDRAFT_224905 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
lgi03013
Nucleocytoplasmic transport
lgi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_224905
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_224905
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LOTGIDRAFT_224905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_224905
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_224905
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_224905
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_224905
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LOTGIDRAFT_224905
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
LOTGIDRAFT_224905
Pre-60S particles
LOTGIDRAFT_224905
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
LOTGIDRAFT_224905
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
LOTGIDRAFT_224905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
Motif
Other DBs
NCBI-GeneID:
20247244
NCBI-ProteinID:
XP_009046981
JGI:
224905
UniProt:
V4AXG1
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MTLADQAAKLLDFNQKLDITLLDEIVTCMYTDVGAQQRTAQEVLTTLKEHPDAWTRVDTI
LEFSSNQQTKYYALQILETVIKTRWKVLPRPQCEGIKKYIVGLIIKTSSDAAVLEKEKVY
LAKLNMILVQILKYEWPRNWPSFIGDIVGASKTNESLCQNNMAILKLLSEEVFDFSSGQM
TQAKAKHLKDTMCSEFSQIFHLCQFVMDNSQNAPLVGSTLETLLRFLNWIPLGYIFETKL
ISTLIYKFLNVPLFRNVTMKCLTEIAGVQVSQLYDEQFIQLFTLTMNQLKQMLPVETNVR
EAYQSGTDDEQNFIQNLSLFLCTYLREHAQLVEKKLDLHPLLMDALQYLCLISEVEEVEI
FKICLEYWNSLTSELYRESPYSTNNSPLILNNQHEMPARRQLYNPVLSKVRRVMISRMAK
PEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYSDTENIMTEKLHNQVNG
TEWSWKNLNTLCWAIGSISGAMHEDDEKRFLVTVIRDLLGLCEQKRGKDNKAIIASNIMY
VVGQYPRFLKAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRQFVQIQVGE
VMPFIEDILNGINTIICDLQPQQVHTFYEAVGLMISAQTEQAAREHLIERYMLLPNQVWD
GIINQATQNVEVLKDADAVKRLGNILKTNVRACKALQHPYVVQLGRIYLDMLNVYKVMSE
NISSAIATNGESVTKQPLIRSMRTVKKETLKLISGWVSRSADHQMVAENFIPPLLDAVLL
DYQRNVPAAREPEVLSTMATIVDRLENHITKDIPQIFDAVFECTLTMINKDFEEYPEHRT
NFFLLLKAVNSHCFQALLNIPAAQFKLVLDSIIWAFKHTMRNVADTGLDILYFLLQNIAK
HDAPAQSFYQTYFTEILQHLFSVVTDSSHTAGLTTQAQILAYMFSTLESGKITIALGGEG
NSAANNVQYIQQFLLNLLKTAFPHLNEPQIEIFIKGLFSFDRDFAAFKEHLRDFLVQIRE
FAGEDLGDLFLEERENAIQQAQEEKRKLQLSVPGIFGPHELQEDMQDD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgcagaccaagcagctaagttgcttgatttcaatcagaaacttgatattact
cttctagatgaaattgtgacatgtatgtacacagatgtaggggctcagcaacggacagct
caagaagtattgaccacattaaaagaacatccagatgcctggactagagttgacacaatt
cttgagttttcatcaaatcaacagaccaaatactatgctctacagattcttgaaacagtt
attaaaactcgctggaaagttttacccagaccacaatgtgaaggaatcaagaaatatatt
gttggtttgattattaagacttcatcagatgcagcagtattagaaaaagaaaaagtttat
ttagcaaaattgaacatgatcttagtacagatattgaagtatgagtggccaagaaattgg
ccgtcattcattggagatatagttggagccagtaaaacaaatgaatctctgtgccaaaat
aatatggcaattctcaaattactaagtgaagaggtgtttgatttctcaagtggtcaaatg
acacaagcaaaagctaaacatttaaaagacacaatgtgcagtgaattttctcaaattttt
catttgtgtcagtttgttatggataattcacagaatgcaccattagttggttcaacatta
gaaaccctactgagatttcttaattggattccattgggatatatctttgaaaccaaatta
atcagcactttaatatacaagtttttaaatgttccactattccgaaatgtaactatgaaa
tgtctcactgaaatagctggtgtacaagtatcacaactatatgatgaacaatttattcag
ttattcacattaaccatgaatcaattaaaacaaatgttaccagttgaaaccaatgtcaga
gaagcatatcaatctggaacagatgatgaacaaaattttatccagaatttaagtttattt
ctatgtacatatttacgtgaacacgcccagttagtggaaaagaagcttgatcttcatcca
cttctaatggatgcattacaatatttatgtttgatatctgaagtagaggaggttgaaatc
ttcaaaatatgtttagaatactggaattccttaacatccgaattgtacagagaaagtcca
tattctactaataattctccgttaattcttaataatcaacatgaaatgccagccagacgc
caactttataaccctgttttatcgaaggtcagacgagttatgatatctagaatggccaaa
ccagaagaagttttagtcgtagaaaatgatcagggagaagttgtcagagaattcatgaaa
gatacagattccattaatctctataaaaacatgagagaaacattagtatatttgacacat
ttggactattcagatactgaaaatatcatgactgaaaaattacataatcaggttaatggt
acagaatggtcgtggaaaaatctgaatacgttatgttgggctattggttctattagtgga
gcaatgcatgaagatgatgaaaaaagatttctagtcacagttatcagggatttgttaggt
ttgtgtgaacagaaacgtggcaaagacaataaagctatcatagcttctaatattatgtat
gttgtgggccaatatccaagatttttaaaagcacattggagatttctgaaaacagttgtg
aacaaattatttgaattcatgcatgaaacccatgatggtgtacaagatatggcttgtgat
acatttataaaaatagcccagaaatgtcgtcgacaattcgtacaaatacaagttggtgaa
gtgatgccatttattgaagacattttaaatggtatcaatacaattatttgtgatcttcaa
ccacaacaggttcacacgttttatgaagctgtagggttaatgattagtgcccaaacagaa
caggcagctagagaacatttaatagaaagatatatgttattacctaatcaagtatgggat
ggtattatcaatcaagctacgcagaatgtggaagtgttaaaagatgcagatgcagttaaa
agattaggaaatattttaaaaaccaatgtaagagcctgtaaagccttacaacatccctat
gtagttcagttaggaagaatctatctggatatgttaaatgtatataaagtcatgagtgaa
aatataagtagtgctatagctactaatggtgaaagtgtcaccaaacaacctttaatacgc
agtatgagaacagtgaaaaaagaaacattaaagttaatatctggctgggttagtcgctct
gctgatcatcagatggtagctgagaatttcatacctccattattagatgctgtattatta
gattatcagagaaatgtacctgctgccagagaaccagaagttttaagtacaatggctact
atagttgacagactagagaaccacataactaaagatataccacagatatttgatgctgta
tttgaatgtacgttaactatgatcaataaagactttgaagaatacccagaacatagaacc
aatttcttcttattattgaaagctgtcaactcacattgtttccaagccttattgaacatc
cctgcagcacagtttaaattggttttagactctataatctgggcgtttaaacataccatg
cgaaatgttgctgacacaggattagatattttatattttctccttcaaaatattgctaaa
catgatgcccctgcacaaagtttttatcagacatattttactgagattcttcaacattta
ttctctgttgtaactgacagttcacatacagcaggattaacaacacaagcccagatattg
gcatatatgttcagtacattagagagtggtaaaataaccatagcattgggcggtgaggga
aacagtgcagctaataatgttcaatatattcaacaatttttactcaatttactgaaaact
gctttcccacatcttaatgaaccacagatagaaatcttcatcaaaggtttattcagtttt
gatagagattttgctgctttcaaagaacatttacgagacttccttgtgcagatcagagag
tttgctggggaagatcttggtgacctgtttttagaagaacgagaaaatgcaattcaacaa
gcccaggaagagaaacgtaaattacagttatctgtgcctggtatatttggaccacatgag
ctacaagaagacatgcaggatgattag
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integrated database retrieval system