KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_224905
Entry
LOTGIDRAFT_224905 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14290  exportin-1
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03008  Ribosome biogenesis in eukaryotes
lgi03013  Nucleocytoplasmic transport
lgi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_224905
   03008 Ribosome biogenesis in eukaryotes
    LOTGIDRAFT_224905
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    LOTGIDRAFT_224905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_224905
   03009 Ribosome biogenesis [BR:lgi03009]
    LOTGIDRAFT_224905
   03016 Transfer RNA biogenesis [BR:lgi03016]
    LOTGIDRAFT_224905
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_224905
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     LOTGIDRAFT_224905
Ribosome biogenesis [BR:lgi03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    LOTGIDRAFT_224905
  Pre-60S particles
    LOTGIDRAFT_224905
Transfer RNA biogenesis [BR:lgi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    LOTGIDRAFT_224905
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     LOTGIDRAFT_224905
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd
Other DBs
NCBI-GeneID: 20247244
NCBI-ProteinID: XP_009046981
JGI: 224905
UniProt: V4AXG1
LinkDB
Position
Unknown
AA seq 1068 aa
MTLADQAAKLLDFNQKLDITLLDEIVTCMYTDVGAQQRTAQEVLTTLKEHPDAWTRVDTI
LEFSSNQQTKYYALQILETVIKTRWKVLPRPQCEGIKKYIVGLIIKTSSDAAVLEKEKVY
LAKLNMILVQILKYEWPRNWPSFIGDIVGASKTNESLCQNNMAILKLLSEEVFDFSSGQM
TQAKAKHLKDTMCSEFSQIFHLCQFVMDNSQNAPLVGSTLETLLRFLNWIPLGYIFETKL
ISTLIYKFLNVPLFRNVTMKCLTEIAGVQVSQLYDEQFIQLFTLTMNQLKQMLPVETNVR
EAYQSGTDDEQNFIQNLSLFLCTYLREHAQLVEKKLDLHPLLMDALQYLCLISEVEEVEI
FKICLEYWNSLTSELYRESPYSTNNSPLILNNQHEMPARRQLYNPVLSKVRRVMISRMAK
PEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYSDTENIMTEKLHNQVNG
TEWSWKNLNTLCWAIGSISGAMHEDDEKRFLVTVIRDLLGLCEQKRGKDNKAIIASNIMY
VVGQYPRFLKAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRQFVQIQVGE
VMPFIEDILNGINTIICDLQPQQVHTFYEAVGLMISAQTEQAAREHLIERYMLLPNQVWD
GIINQATQNVEVLKDADAVKRLGNILKTNVRACKALQHPYVVQLGRIYLDMLNVYKVMSE
NISSAIATNGESVTKQPLIRSMRTVKKETLKLISGWVSRSADHQMVAENFIPPLLDAVLL
DYQRNVPAAREPEVLSTMATIVDRLENHITKDIPQIFDAVFECTLTMINKDFEEYPEHRT
NFFLLLKAVNSHCFQALLNIPAAQFKLVLDSIIWAFKHTMRNVADTGLDILYFLLQNIAK
HDAPAQSFYQTYFTEILQHLFSVVTDSSHTAGLTTQAQILAYMFSTLESGKITIALGGEG
NSAANNVQYIQQFLLNLLKTAFPHLNEPQIEIFIKGLFSFDRDFAAFKEHLRDFLVQIRE
FAGEDLGDLFLEERENAIQQAQEEKRKLQLSVPGIFGPHELQEDMQDD
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgacgcttgcagaccaagcagctaagttgcttgatttcaatcagaaacttgatattact
cttctagatgaaattgtgacatgtatgtacacagatgtaggggctcagcaacggacagct
caagaagtattgaccacattaaaagaacatccagatgcctggactagagttgacacaatt
cttgagttttcatcaaatcaacagaccaaatactatgctctacagattcttgaaacagtt
attaaaactcgctggaaagttttacccagaccacaatgtgaaggaatcaagaaatatatt
gttggtttgattattaagacttcatcagatgcagcagtattagaaaaagaaaaagtttat
ttagcaaaattgaacatgatcttagtacagatattgaagtatgagtggccaagaaattgg
ccgtcattcattggagatatagttggagccagtaaaacaaatgaatctctgtgccaaaat
aatatggcaattctcaaattactaagtgaagaggtgtttgatttctcaagtggtcaaatg
acacaagcaaaagctaaacatttaaaagacacaatgtgcagtgaattttctcaaattttt
catttgtgtcagtttgttatggataattcacagaatgcaccattagttggttcaacatta
gaaaccctactgagatttcttaattggattccattgggatatatctttgaaaccaaatta
atcagcactttaatatacaagtttttaaatgttccactattccgaaatgtaactatgaaa
tgtctcactgaaatagctggtgtacaagtatcacaactatatgatgaacaatttattcag
ttattcacattaaccatgaatcaattaaaacaaatgttaccagttgaaaccaatgtcaga
gaagcatatcaatctggaacagatgatgaacaaaattttatccagaatttaagtttattt
ctatgtacatatttacgtgaacacgcccagttagtggaaaagaagcttgatcttcatcca
cttctaatggatgcattacaatatttatgtttgatatctgaagtagaggaggttgaaatc
ttcaaaatatgtttagaatactggaattccttaacatccgaattgtacagagaaagtcca
tattctactaataattctccgttaattcttaataatcaacatgaaatgccagccagacgc
caactttataaccctgttttatcgaaggtcagacgagttatgatatctagaatggccaaa
ccagaagaagttttagtcgtagaaaatgatcagggagaagttgtcagagaattcatgaaa
gatacagattccattaatctctataaaaacatgagagaaacattagtatatttgacacat
ttggactattcagatactgaaaatatcatgactgaaaaattacataatcaggttaatggt
acagaatggtcgtggaaaaatctgaatacgttatgttgggctattggttctattagtgga
gcaatgcatgaagatgatgaaaaaagatttctagtcacagttatcagggatttgttaggt
ttgtgtgaacagaaacgtggcaaagacaataaagctatcatagcttctaatattatgtat
gttgtgggccaatatccaagatttttaaaagcacattggagatttctgaaaacagttgtg
aacaaattatttgaattcatgcatgaaacccatgatggtgtacaagatatggcttgtgat
acatttataaaaatagcccagaaatgtcgtcgacaattcgtacaaatacaagttggtgaa
gtgatgccatttattgaagacattttaaatggtatcaatacaattatttgtgatcttcaa
ccacaacaggttcacacgttttatgaagctgtagggttaatgattagtgcccaaacagaa
caggcagctagagaacatttaatagaaagatatatgttattacctaatcaagtatgggat
ggtattatcaatcaagctacgcagaatgtggaagtgttaaaagatgcagatgcagttaaa
agattaggaaatattttaaaaaccaatgtaagagcctgtaaagccttacaacatccctat
gtagttcagttaggaagaatctatctggatatgttaaatgtatataaagtcatgagtgaa
aatataagtagtgctatagctactaatggtgaaagtgtcaccaaacaacctttaatacgc
agtatgagaacagtgaaaaaagaaacattaaagttaatatctggctgggttagtcgctct
gctgatcatcagatggtagctgagaatttcatacctccattattagatgctgtattatta
gattatcagagaaatgtacctgctgccagagaaccagaagttttaagtacaatggctact
atagttgacagactagagaaccacataactaaagatataccacagatatttgatgctgta
tttgaatgtacgttaactatgatcaataaagactttgaagaatacccagaacatagaacc
aatttcttcttattattgaaagctgtcaactcacattgtttccaagccttattgaacatc
cctgcagcacagtttaaattggttttagactctataatctgggcgtttaaacataccatg
cgaaatgttgctgacacaggattagatattttatattttctccttcaaaatattgctaaa
catgatgcccctgcacaaagtttttatcagacatattttactgagattcttcaacattta
ttctctgttgtaactgacagttcacatacagcaggattaacaacacaagcccagatattg
gcatatatgttcagtacattagagagtggtaaaataaccatagcattgggcggtgaggga
aacagtgcagctaataatgttcaatatattcaacaatttttactcaatttactgaaaact
gctttcccacatcttaatgaaccacagatagaaatcttcatcaaaggtttattcagtttt
gatagagattttgctgctttcaaagaacatttacgagacttccttgtgcagatcagagag
tttgctggggaagatcttggtgacctgtttttagaagaacgagaaaatgcaattcaacaa
gcccaggaagagaaacgtaaattacagttatctgtgcctggtatatttggaccacatgag
ctacaagaagacatgcaggatgattag

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