Lottia gigantea (owl limpet): LOTGIDRAFT_225148
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Entry
LOTGIDRAFT_225148 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_225148
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
LOTGIDRAFT_225148
Ubiquitin system [BR:
lgi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
LOTGIDRAFT_225148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_6
EF-hand_1
EF-hand_7
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
20247264
NCBI-ProteinID:
XP_009047551
JGI:
225148
UniProt:
V4B6Q9
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAAFSESEPIDSDTLQRLTKMLWGNNVKEDVFDRWSQGFIFSEDEPTALAQLEGGPCAII
VPVQAYILKNIFFSDHPKVELSNLSKEECCNYLYKALVEILLSVNSSTYYIVTLSEPHSN
QDGGSNTTCQGNSENRETGERDFKRRKIDRETFHTRLRFLRCESENEMKRAVTSLLPVFQ
QKYGLLLYMYSILLSRGIDQIRNEVGDNDEPLIDGVHGHGSQSLINLLITGRALSNVFDN
EKDVCGLILRGIQQQSVVGFLTLLEHMRYCEVGWYLKNPCVPIWVLGSETHLTVLFAKDR
GLVENNSPIKNAQQIFATFDPEGNGFIQTSQLGDVMEALNLFCDKEYVDIMKGKLDGESL
GIITSSSFLGEFYAEELNNASTPQKFEIQHYNGLARSCHNKKIKYVKGTAELPNEIELQI
VTDTSPIKLCLQTKWPSIELRWQGDFIPSLN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttcagaatcagaaccaattgatagtgatacattacaaagactgactaag
atgctatggggcaacaatgtaaaagaagacgtttttgaccggtggtcacaaggttttata
tttagtgaagatgaacccactgctcttgctcaacttgaaggtggaccatgtgcaataata
gttccagtacaagcttatattcttaaaaacatatttttctcagatcatcctaaagtagaa
ctatcaaacttatcaaaagaagaatgttgtaactatctatacaaagctttagtagaaatt
ttattgtctgtaaatagttcaacctactatatagtaacattatcagaaccacatagtaac
caagatggaggaagtaatacaacttgtcagggaaatagtgaaaatagggaaactggtgaa
cgtgattttaaaagacgaaaaatagacagggaaacattccacactagattaaggttttta
agatgtgaatcagaaaatgaaatgaaaagagcagtaacatcattattacctgtatttcaa
cagaaatatggtttattattatatatgtattctattttattatcacggggaatagaccag
atcagaaatgaagtaggagataatgatgaacctttaatagatggtgttcatggacatggc
agtcagagtttgattaatctattgataacaggaagagctctttctaatgtttttgataat
gaaaaagatgtctgtggtttgatattacgtggtatacagcaacaatcagtagtgggtttt
ctaacattattagaacatatgagatattgtgaggttggttggtatttaaaaaatccatgt
gttcccatttgggtgttaggaagtgaaacacatttaactgttttgtttgctaaggacaga
ggtttagtagaaaataatagtcctattaaaaatgctcaacaaatatttgctacttttgat
ccagaaggtaatggttttatacagacaagtcaattaggagatgttatggaagcgttaaat
ttattctgtgataaagaatatgttgatataatgaaaggtaaattagatggtgaatcatta
ggtataataacctctagtagttttcttggtgaattctatgccgaggaattaaacaatgcc
tctacaccacagaagtttgaaattcagcattataatggtctagctaggtcttgtcacaat
aagaagataaaatatgtgaaaggtacagcagaattacccaatgaaatagaactacaaata
gtaactgacacgtcacctattaaactttgtttacaaacaaaatggccatcaatagaacta
cggtggcaaggagattttataccttcgttaaattaa
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