Lottia gigantea (owl limpet): LOTGIDRAFT_228373
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Entry
LOTGIDRAFT_228373 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_228373
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_228373
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_228373
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LOTGIDRAFT_228373
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LOTGIDRAFT_228373
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LOTGIDRAFT_228373
DSBR (double strand breaks repair)
Other DSBR factors
Others
LOTGIDRAFT_228373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
GvpD_bR2
Beta-prop_Vps41
Beta-prop_SPT8
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
20247637
NCBI-ProteinID:
XP_009051663
JGI:
228373
UniProt:
V4A1W1
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MKSAVRSSKRKRESVEMDKTKSKTKRFKDEVIEDLELPAVSKSIEFDPSPRKDEIQVKNE
NIKPDSLDEDSNDEEEDEDYELVRQRNIEANNKFLSQIGMFEAKQQLSSAVKPKKESSQR
GIKKPKKIREPIVIRKSRRLARIDPEGNHLPDPVVLEYNKPIMPPVCPVDMSAILLNDDD
QDYHKKVSSIFTSTKIPEQKPLSSALQSYLKEINNLKLEETGIAKVVPTRVFSLAIHPMV
DKLLIAAGGKWGGVGLWDVDSTDNQDGVVAYKPYVSPVNWVSFHQDYPAHIYTTSYDGSC
RYADFETGKFLEIYAVPSDENILLRNADFLTSETLLISQSDGCVALVDRRTPSTTAENIY
EVHERPLRTLNIHPDKQYFCTASLDATVKVWDIRQMKVKKNTCISEGKHSRVVNSANFSP
ITGKHCVSLSDDNTIHIYDVDANKQLKLKKSIRHNNHTGRWLTKLRCIWHPRREDLFISG
SMERPRRIEMFSDEGTLVKTFSNEDYLGSVCSINAFHPSLNILAGANSSGRVHVFR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggctgtcagatccagcaaaaggaagagagagtcagttgaaatggataaaact
aaaagcaaaacaaaacgatttaaagatgaagtcattgaagatttagaattaccagccgtt
agcaaatcaatagagtttgacccaagtccaagaaaagatgagatacaagtcaagaatgaa
aatataaaaccagatagtttggatgaggacagcaatgatgaggaagaagatgaagactat
gaactggtccgacagagaaatattgaagccaataataaatttctatcacagattggaatg
tttgaggcaaaacaacaacttagttctgctgttaaacctaagaaagaatcttcacaaaga
ggaataaagaaaccgaagaagattcgagaaccaatagtgataagaaagagtagaagatta
gctagaatagatccagaaggcaaccatcttcctgatcctgttgtcttagaatataacaaa
ccaataatgcctcccgtatgtcctgttgatatgtctgctattttattgaatgatgatgat
caggactaccataagaaagtgtctagtatattcacatctacaaaaattcctgaacaaaaa
ccgttatcatctgctttacaaagttatttaaaagaaatcaacaacttaaaactggaagaa
acgggaatagcgaaagtggtgcccactagagtgttttcactggcaatacatcccatggta
gataaactattaatagctgctggtggcaagtggggtggtgtgggattatgggatgttgat
tctactgacaaccaagatggcgtagtggcttataaaccatatgtgagtcctgtaaactgg
gtctcttttcatcaagattacccagcccacatttacacaacttcctatgatggttcatgt
agatatgctgattttgaaacagggaagtttttagagatatatgctgtacctagtgatgag
aatatattattacgcaatgctgattttctaacatcagagacattactgatatcacagagt
gatggttgtgtagcattagtagatagacgaacaccaagcactacagcagagaatatatat
gaagttcatgaaagacctttacgtaccctcaatatacatccagataaacagtatttctgt
acagctagtctagacgcaactgtaaaagtttgggatatacgtcaaatgaaagtaaagaag
aatacctgtataagtgaagggaaacacagtcgtgtagtaaacagtgctaacttctcacct
attactggcaaacattgtgtatcattatcagatgataatactattcatatttatgatgta
gatgctaataaacaattaaaactaaagaaatccattagacataacaatcatacaggaaga
tggttaactaagttacgttgtatttggcatcctaggagagaagatttatttatatctggt
agtatggaacgacctagacggattgagatgttttctgatgaaggaacactggtcaagacg
ttttctaatgaagattatttaggttctgtgtgttcaatcaatgcttttcatccctccttg
aatatactagctggtgctaactctagtggacgtgttcatgtgtttagatga
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integrated database retrieval system
