Lottia gigantea (owl limpet): LOTGIDRAFT_229010
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Entry
LOTGIDRAFT_229010 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_229010
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_229010
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_229010
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
Helicases
LOTGIDRAFT_229010
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
LOTGIDRAFT_229010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PAC2
Motif
Other DBs
NCBI-GeneID:
20247869
NCBI-ProteinID:
XP_009060126
JGI:
229010
UniProt:
V3ZD96
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MTTKSDSDSEPEIENSDSEEKDVTFKSLGIVDVLCEACENLKWKKPTKIQREAIPIALSG
KDIIGLAETGSGKTGAFALPILQSLLDNPQKLFALILTPTRELAFQISEQFVALGTSIGV
KTAVIVGGMDSMSQAMMLAKKPHIIVATPGRLLDHLENTKGFSLSNLKYLVMDEADRILN
MDFGKEIDKILKSIPRQRRTCLYSATMTQKVHKLQRASLVDPVKVQVSSKYQTVEKLQQY
YLFIPVKYKDVYLVYILNELAGNSFMIFCSTCATTQRIALLLRNLGFTAVPLNGQMNQAK
RLGALNKFKSKSRSIIMATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG
KAITFVSQYDVELYQRIEHLISKKLPLYKTEEEEVMVLMERVSEAQRLAKLDMADLGKKR
KSKGDNDDTEDSVGVRKKMKKKNKR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaagagtgattcagattctgaacccgaaattgaaaactcagatagtgaagaa
aaagatgttactttcaaaagtttaggtattgtagatgttttatgtgaagcttgtgaaaat
ttgaaatggaagaaaccaaccaagatacaaagagaagcaatccctattgccctctcagga
aaagatattataggattagctgagactggttctggaaaaactggtgcatttgctttacca
atattacaatccttattagataatccacagaagttatttgctttgatcttaacacctact
agagagttggcttttcagatatcagaacaatttgtagctcttggaacatctattggggtt
aaaacagctgtgatagttggaggaatggacagtatgagtcaagctatgatgttggctaaa
aaacctcacataatagttgccacacctggaagattattagatcatttagaaaatacaaaa
ggcttttcattaagtaatctaaaatatctggttatggatgaagctgatagaattttaaat
atggattttggaaaagagattgataaaatattgaaatcaataccaagacaaagacgaaca
tgtttatactcagccacaatgacacagaaggtacacaagttacagcgtgcctcattagtt
gatccagtcaaagtacaggtgtccagtaaatatcaaacagtagaaaaattacaacaatat
tatctatttatacctgttaaatataaggatgtctatctggtatatattttaaatgagtta
gcaggaaatagctttatgatattttgtagtacctgtgctactacacagagaatagcatta
ttactacgtaacctgggttttacagctgtacctttaaatggacaaatgaatcaggccaaa
agattaggtgctctaaataaatttaaaagtaaaagtagatctattattatggcaacagat
gtagcaagcagaggattagatattccacatgtagatgttgtgattaattttgatatacca
actcattctaaagattatatacatcgtgttggtagaacagctagagcaggacgatcaggg
aaagccatcacctttgtttcacaatatgatgtagagttatatcagaggatagaacattta
atcagtaaaaagttaccactatataagactgaagaagaagaagtaatggttctaatggaa
agagtatcagaagctcaaagattagctaaattagatatggctgaccttggcaagaaaaga
aaatctaaaggtgataatgatgatacagaagattcagttggtgttcggaaaaaaatgaag
aaaaaaaataaacgttaa
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